ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123087246	polyadenylation factor subunit 2
osa-u.5	4333766	uncharacterized LOC4333766
zma-u.5	100382297	uncharacterized LOC100382297
zma-u.5	100382366	uncharacterized LOC100382366
ath-u.5	AT1G27090	glycine-rich protein
gma-u.5	100816385	uncharacterized LOC100816385
gma-u.5	100779117	uncharacterized LOC100779117
gma-u.5	100819759	uncharacterized LOC100819759
sly-u.5	101255911	uncharacterized protein C12G12.07c
sly-u.5	101253779	uncharacterized protein C12G12.07c
vvi-u.5	100248339	uncharacterized LOC100248339
ppo-u.5	18102352	uncharacterized LOC18102352
ppo-u.5	7469077	uncharacterized LOC7469077
mtr-u.5	11414964	uncharacterized protein C12G12.07c

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_044365145.1 [sequence] [blastp]

Subcellular
localization
wolf

pero 3, cyto 2, nucl 1, mito 1, extr 1, cyto_E.R. 1

(predict for XP_044365145.1)

Subcellular
localization
TargetP

chlo 8

(predict for XP_044365145.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123087246	osa-u.5 for 4333766	zma-u.5 for 100382297	zma-u.5 for 100382366	ath-u.5 for AT1G27090	gma-u.5 for 100816385	gma-u.5 for 100779117	gma-u.5 for 100819759	sly-u.5 for 101255911	sly-u.5 for 101253779	vvi-u.5 for 100248339	ppo-u.5 for 18102352	ppo-u.5 for 7469077	mtr-u.5 for 11414964

Ortholog ID: 4826

Species

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

nuclear transport factor 2

polyadenylation factor subunit 2

uncharacterized LOC100834871

uncharacterized LOC4333766

uncharacterized LOC100382297

uncharacterized LOC100382366

uncharacterized LOC8054151

glycine-rich protein

uncharacterized LOC100816385

uncharacterized LOC100816406

uncharacterized protein C12G12.07c

uncharacterized LOC103835629

uncharacterized LOC100248339

uncharacterized LOC7469077

uncharacterized LOC18102352

uncharacterized protein C12G12.07c

uncharacterized LOC107948066

uncharacterized LOC107903864

uncharacterized BNAC08G20270D

uncharacterized LOC106436755

uncharacterized LOC102594597

uncharacterized LOC102597833

uncharacterized LOC102619416

uncharacterized LOC107786080

uncharacterized LOC107797108

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	2
bdi04141	Protein processing in endoplasmic reticulum	2
bdi03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	2
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	2
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	7
sbi03013	Nucleocytoplasmic transport	2
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	3
ath03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	2
sly03015	mRNA surveillance pathway	2
sly04814	Motor proteins	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	5
sly03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2
bra03050	Proteasome	2
bra00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	3
ppo03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	6
mtr03018	RNA degradation	2
mtr03082	ATP-dependent chromatin remodeling	2
mtr03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4
ghi00220	Arginine biosynthesis	3
ghi01210	2-Oxocarboxylic acid metabolism	3
ghi01230	Biosynthesis of amino acids	3
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4
ghi03008	Ribosome biogenesis in eukaryotes	2
ghi03018	RNA degradation	2
ghi03083	Polycomb repressive complex	2
ghi00220	Arginine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	4
sot03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	10
nta00480	Glutathione metabolism	2
nta03010	Ribosome	2

Expression

Expression pattern

Entrez Gene ID^*

123090708

123087246

100834871

4333766

100382297

100382366

8054151

839598

100816385

100816406

101253779

101255911

103835629

100248339

7469077

18102352

11414964

107948066

107903864

106361947

106436755

102594597

102597833

102619416

107786080

107797108

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123087246 (tae-r.2 coexpression data)

Top 50 enrichment test to 123087246 (tae-r.2 coexpression data)


Species	tae	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre
Paralog	1	1	2	1	3	2	1	2	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123087246 (tae-r.2 coexpression data)

Top 50 enrichment test to 123087246 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**