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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7497256   retrovirus-related Pol polyprotein from transposon TNT 1-94 
 ppo-r.4   7497256   retrovirus-related Pol polyprotein from transposon TNT 1-94 
 ppo-m.4   7497256   retrovirus-related Pol polyprotein from transposon TNT 1-94 
 gma-u.5   100800963   uncharacterized LOC100800963 
 gma-u.5   100818901   uncharacterized LOC100818901 
 mtr-u.5   112416335   uncharacterized LOC112416335 
 ath-u.5   AT4G00980   zinc knuckle (CCHC-type) family protein 
 bra-r.6   103836859   uncharacterized LOC103836859 
 ghi-r.1   121223712   uncharacterized LOC121223712 
 ghi-r.1   107922697   copia protein 
 bna-r.1   125593232   uncharacterized LOC125593232 
 bna-r.1   BNAA09G00310D   uncharacterized BNAA09G00310D 
 cit-r.1   127901274   uncharacterized LOC127901274 
 cit-r.1   102626154   hypothetical protein 
 nta-r.1   107784729   uncharacterized LOC107784729 
 nta-r.1   107760831   uncharacterized LOC107760831 

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Top 50 coexpressed genes to 7497256 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7497256 (ppo-u.5 coexpression data)

CoexMap"7497256"


ppoLOC7497256 | Entrez gene ID : 7497256    
Species ppo gma mtr ath bra ghi bna cit nta cre vvi hvu tae bdi osa zma sly sot sbi
Paralog 3 2 1 1 1 2 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2205 genes)  IEA  
Protein XP_024450270.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cysk 4  (predict for XP_024450270.2)
Subcellular
localization
TargetP
other 8  (predict for XP_024450270.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7497256
ppo-r.4
for
7497256
ppo-m.4
for
7497256
gma-u.5
for
100800963
gma-u.5
for
100818901
mtr-u.5
for
112416335
ath-u.5
for
AT4G00980
bra-r.6
for
103836859
ghi-r.1
for
121223712
ghi-r.1
for
107922697
bna-r.1
for
125593232
bna-r.1
for
BNAA09G00310D
cit-r.1
for
127901274
cit-r.1
for
102626154
nta-r.1
for
107784729
nta-r.1
for
107760831


Ortholog ID: 13733
Species ppo gma gma mtr ath bra ghi ghi bna bna cit cit nta nta
Symbol LOC7497256 LOC100800963 LOC100818901 LOC112416335 AT4G00980 LOC103836859 LOC121223712 LOC107922697 LOC125593232 BNAA09G00310D LOC127901274 LOC102626154 LOC107784729 LOC107760831
Function* retrovirus-related Pol polyprotein from transposon TNT 1-94 uncharacterized LOC100800963 uncharacterized LOC100818901 uncharacterized LOC112416335 zinc knuckle (CCHC-type) family protein uncharacterized LOC103836859 uncharacterized LOC121223712 copia protein uncharacterized LOC125593232 uncharacterized BNAA09G00310D uncharacterized LOC127901274 hypothetical protein uncharacterized LOC107784729 uncharacterized LOC107760831
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr03082 ATP-dependent chromatin remodeling 2
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03450 Non-homologous end-joining 2
nta00730 Thiamine metabolism 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03440 Homologous recombination 2
nta03450 Non-homologous end-joining 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7497256 100800963 100818901 112416335 827935 103836859 121223712 107922697 125593232 106365731 127901274 102626154 107784729 107760831
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