ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	107784729	uncharacterized LOC107784729
ath-u.5	AT4G00980	zinc knuckle (CCHC-type) family protein
gma-u.5	100800963	uncharacterized LOC100800963
gma-u.5	100818901	uncharacterized LOC100818901
ppo-u.5	7497256	retrovirus-related Pol polyprotein from transposon TNT 1-94
mtr-u.5	112416335	uncharacterized LOC112416335

functional annotation

KEGG

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(2987 genes)

IEA

GO CC

GO MF

GO:0008270 [list] [network] zinc ion binding	(2210 genes)	IEA
GO:0003677 [list] [network] DNA binding	(3714 genes)	IEA

Protein

XP_016461387.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto 2

(predict for XP_016461387.2)

Subcellular
localization
TargetP

other 8

(predict for XP_016461387.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107784729	ath-u.5 for AT4G00980	gma-u.5 for 100800963	gma-u.5 for 100818901	ppo-u.5 for 7497256	mtr-u.5 for 112416335

Ortholog ID: 13733

Species

nta

ath

gma

bra

ppo

mtr

ghi

bna

cit

Symbol

Function^*

uncharacterized LOC107784729

uncharacterized LOC107760831

zinc knuckle (CCHC-type) family protein

uncharacterized LOC100800963

uncharacterized LOC100818901

uncharacterized LOC103836859

retrovirus-related Pol polyprotein from transposon TNT 1-94

uncharacterized LOC112416335

copia protein

uncharacterized LOC121223712

uncharacterized BNAA09G00310D

uncharacterized LOC125593232

uncharacterized LOC127901274

hypothetical protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03440	Homologous recombination	2
nta03450	Non-homologous end-joining	2
nta00730	Thiamine metabolism	2
nta00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta03440	Homologous recombination	2
nta03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	2
mtr03082	ATP-dependent chromatin remodeling	2
mtr03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	2
ghi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	4
ghi03083	Polycomb repressive complex	4

Expression

Expression pattern

Entrez Gene ID^*

107784729

107760831

827935

100800963

100818901

103836859

7497256

112416335

107922697

121223712

106365731

125593232

127901274

102626154


Species	nta	ath	gma	ppo	mtr	bdi	hvu	bra	vvi	cit	bna	sbi	sly	ghi	osa	sot	cre	tae	zma
Paralog	1	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107784729 (nta-r.1 coexpression data)

Top 50 enrichment test to 107784729 (nta-r.1 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107784729 (nta-r.1 coexpression data)

Top 50 enrichment test to 107784729 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**