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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-r.6  TCP11  TCP transcription factor 11 
 sly-u.5  TCP11  TCP transcription factor 11 
 sly-u.5  TCP12  TCP transcription factor 12 
 sly-u.5  TCP13  TCP transcription factor 13 
 sot-r.1  102589240  transcription factor TCP8 
 sot-r.1  102597862  transcription factor TCP8 
 sot-r.1  102602611  transcription factor TCP23-like 
 nta-r.1  107831606  transcription factor TCP8 
 nta-r.1  107826452  transcription factor TCP23-like 
 nta-r.1  107819025  transcription factor TCP22-like 
 ath-u.5  AT1G35560  TCP family transcription factor 
 ath-u.5  TCP8  TCP family transcription factor 
 ath-u.5  AT1G72010  TCP family transcription factor 
 gma-u.5  100814151  transcription factor TCP8 
 gma-u.5  100812983  transcription factor TCP8 
 bra-r.6  103852745  transcription factor TCP22 
 bra-r.6  103831715  transcription factor TCP22 
 bra-r.6  103838634  transcription factor TCP8 
 vvi-u.5  100243917  transcription factor TCP8 
 vvi-u.5  100266605  transcription factor TCP8 
 ppo-u.5  7475796  transcription factor TCP23 
 ppo-u.5  18104436  transcription factor TCP23 
 ppo-u.5  18098300  transcription factor TCP8 
 mtr-u.5  11424191  transcription factor TCP8 
 ghi-r.1  107898697  transcription factor TCP8 
 ghi-r.1  107938762  transcription factor TCP8 
 ghi-r.1  107925442  transcription factor TCP8 
 bna-r.1  106366610  transcription factor TCP8 
 bna-r.1  111212898  transcription factor TCP8 
 bna-r.1  106395841  transcription factor TCP22-like 
 cit-r.1  102609553  transcription factor TCP8 
 zma-u.5  103650647  transcription factor PCF3 
 zma-u.5  100384575  uncharacterized LOC100384575 
 tae-r.2  123102928  transcription factor PCF3 
 tae-r.2  123111027  transcription factor PCF3 
 tae-r.2  123120088  transcription factor PCF3 
 hvu-r.1  123397118  transcription factor PCF3-like 
 bdi-r.1  100827829  transcription factor PCF3 

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Top 50 coexpressed genes to TCP11 (sly-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TCP11 (sly-r.6 coexpression data)

CoexMap"100736247"


slyTCP11 | Entrez gene ID : 100736247
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit zma tae hvu bdi sbi cre osa
Paralog 4 3 3 3 2 3 2 3 1 3 3 1 2 3 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (778 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1125 genes)  IEA  
Protein NP_001234831.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001234831.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001234831.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sly-r.6
for
TCP11


sly-u.5
for
TCP11


sly-u.5
for
TCP12


sly-u.5
for
TCP13


sot-r.1
for
102589240


sot-r.1
for
102597862


sot-r.1
for
102602611


nta-r.1
for
107831606


nta-r.1
for
107826452


nta-r.1
for
107819025


ath-u.5
for
AT1G35560


ath-u.5
for
TCP8


ath-u.5
for
AT1G72010


gma-u.5
for
100814151


gma-u.5
for
100812983


bra-r.6
for
103852745


bra-r.6
for
103831715


bra-r.6
for
103838634


vvi-u.5
for
100243917


vvi-u.5
for
100266605


ppo-u.5
for
7475796


ppo-u.5
for
18104436


ppo-u.5
for
18098300


mtr-u.5
for
11424191


ghi-r.1
for
107898697


ghi-r.1
for
107938762


ghi-r.1
for
107925442


bna-r.1
for
106366610


bna-r.1
for
111212898


bna-r.1
for
106395841


cit-r.1
for
102609553


zma-u.5
for
103650647


zma-u.5
for
100384575


tae-r.2
for
123102928


tae-r.2
for
123111027


tae-r.2
for
123120088


hvu-r.1
for
123397118


bdi-r.1
for
100827829



Ortholog ID: 4006
Species sly sly sly sot sot sot nta nta nta ath ath ath gma gma bra bra bra vvi vvi ppo ppo ppo mtr ghi ghi ghi bna bna bna cit zma zma tae tae tae hvu bdi
Symbol TCP11 TCP12 TCP13 LOC102589240 LOC102597862 LOC102602611 LOC107831606 LOC107826452 LOC107819025 AT1G35560 TCP8 AT1G72010 LOC100814151 LOC100812983 LOC103852745 LOC103831715 LOC103838634 LOC100243917 LOC100266605 LOC7475796 LOC18104436 LOC18098300 LOC11424191 LOC107898697 LOC107922196 LOC107904889 LOC111212898 LOC106395414 LOC106376817 LOC102609553 LOC103650647 LOC100384575 LOC123102928 LOC123111027 LOC123120088 LOC123397118 LOC100827829
Function* TCP transcription factor 11 TCP transcription factor 12 TCP transcription factor 13 transcription factor TCP8 transcription factor TCP8 transcription factor TCP23-like transcription factor TCP8 transcription factor TCP23-like transcription factor TCP22-like TCP family transcription factor TCP family transcription factor TCP family transcription factor transcription factor TCP8 transcription factor TCP8 transcription factor TCP22 transcription factor TCP22 transcription factor TCP8 transcription factor TCP8 transcription factor TCP8 transcription factor TCP23 transcription factor TCP23 transcription factor TCP8 transcription factor TCP8 transcription factor TCP8 transcription factor TCP8 transcription factor TCP23 transcription factor TCP8 transcription factor TCP22-like transcription factor TCP22-like transcription factor TCP8 transcription factor PCF3 uncharacterized LOC100384575 transcription factor PCF3 transcription factor PCF3 transcription factor PCF3 transcription factor PCF3-like transcription factor PCF3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 5
nta04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100736247 100736519 100736549 102589240 102597862 102602611 107831606 107826452 107819025 840452 842177 843532 100814151 100812983 103852745 103831715 103838634 100243917 100266605 7475796 18104436 18098300 11424191 107898697 107922196 107904889 111212898 106395414 106376817 102609553 103650647 100384575 123102928 123111027 123120088 123397118 100827829
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