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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18098300   transcription factor TCP8 
 ppo-r.4   18098300   transcription factor TCP8 
 ppo-u.5   18104436   transcription factor TCP23 
 ppo-u.5   7475796   transcription factor TCP23 
 gma-u.5   100814151   transcription factor TCP8 
 gma-u.5   100812983   transcription factor TCP8 
 mtr-u.5   11424191   transcription factor TCP8 
 ath-u.5   AT1G35560   TCP family transcription factor 
 ath-u.5   TCP8   TCP family transcription factor 
 ath-u.5   AT1G72010   TCP family transcription factor 
 vvi-u.5   100243917   transcription factor TCP8 
 vvi-u.5   100266605   transcription factor TCP8 
 sly-u.5   TCP12   TCP transcription factor 12 
 sly-u.5   TCP13   TCP transcription factor 13 
 sly-u.5   TCP11   TCP transcription factor 11 
 zma-u.5   100384575   uncharacterized LOC100384575 
 zma-u.5   103650647   transcription factor PCF3 

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Top 50 coexpressed genes to 18098300 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18098300 (ppo-u.5 coexpression data)

CoexMap"18098300"


ppoLOC18098300 | Entrez gene ID : 18098300    
Species ppo gma mtr ath vvi sly zma tae osa hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 4 2 1 3 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (847 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1363 genes)  IEA  
Protein XP_006385015.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_006385015.3)
Subcellular
localization
TargetP
other 8  (predict for XP_006385015.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18098300

.
ppo-r.4
for
18098300

.
ppo-u.5
for
18104436

.
ppo-u.5
for
7475796

.
gma-u.5
for
100814151

.
gma-u.5
for
100812983

.
mtr-u.5
for
11424191

.
ath-u.5
for
AT1G35560

.
ath-u.5
for
TCP8

.
ath-u.5
for
AT1G72010

.
vvi-u.5
for
100243917

.
vvi-u.5
for
100266605

.
sly-u.5
for
TCP12

.
sly-u.5
for
TCP13

.
sly-u.5
for
TCP11

.
zma-u.5
for
100384575

.
zma-u.5
for
103650647

.


Ortholog ID: 4006
Species ath ath gma gma sly sly zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sot sot cit bdi nta nta
Symbol AT1G35560 AT1G72010 LOC100814151 LOC100812983 TCP12 TCP13 LOC100384575 LOC103650647 LOC103831715 LOC103838634 LOC100266605 LOC100243917 LOC7475796 LOC18104436 LOC11424191 LOC123111027 LOC123102928 LOC123397118 LOC107922196 LOC107898697 LOC106395414 LOC111212898 LOC102589240 LOC102602611 LOC102609553 LOC100827829 LOC107819025 LOC107826452
Function* TCP family transcription factor TCP family transcription factor transcription factor TCP8 transcription factor TCP8 TCP transcription factor 12 TCP transcription factor 13 uncharacterized LOC100384575 transcription factor PCF3 transcription factor TCP22 transcription factor TCP8 transcription factor TCP8 transcription factor TCP8 transcription factor TCP23 transcription factor TCP23 transcription factor TCP8 transcription factor PCF3 transcription factor PCF3 transcription factor PCF3-like transcription factor TCP8 transcription factor TCP8 transcription factor TCP22-like transcription factor TCP8 transcription factor TCP8 transcription factor TCP23-like transcription factor TCP8 transcription factor PCF3 transcription factor TCP22-like transcription factor TCP23-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 5
nta04075 Plant hormone signal transduction 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840452 843532 100814151 100812983 100736519 100736549 100384575 103650647 103831715 103838634 100266605 100243917 7475796 18104436 11424191 123111027 123102928 123397118 107922196 107898697 106395414 111212898 102589240 102602611 102609553 100827829 107819025 107826452
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