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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107925442  transcription factor TCP8 
 ghi-r.1  107938762  transcription factor TCP8 
 ghi-r.1  107922196  transcription factor TCP8 
 ghi-r.1  107904889  transcription factor TCP23 
 ath-u.5  AT1G35560  TCP family transcription factor 
 ath-u.5  TCP8  TCP family transcription factor 
 ath-u.5  AT1G72010  TCP family transcription factor 
 bra-r.6  103838634  transcription factor TCP8 
 bra-r.6  103831715  transcription factor TCP22 
 bra-r.6  103852745  transcription factor TCP22 
 bna-r.1  106355943  transcription factor TCP22-like 
 bna-r.1  106395841  transcription factor TCP22-like 
 bna-r.1  111212898  transcription factor TCP8 
 cit-r.1  102609553  transcription factor TCP8 
 gma-u.5  100814151  transcription factor TCP8 
 gma-u.5  100812983  transcription factor TCP8 
 vvi-u.5  100266605  transcription factor TCP8 
 vvi-u.5  100243917  transcription factor TCP8 
 ppo-u.5  7475796  transcription factor TCP23 
 ppo-u.5  18104436  transcription factor TCP23 
 ppo-u.5  18098300  transcription factor TCP8 
 mtr-u.5  11424191  transcription factor TCP8 
 sly-u.5  TCP11  TCP transcription factor 11 
 sly-u.5  TCP13  TCP transcription factor 13 
 sly-u.5  TCP12  TCP transcription factor 12 
 sot-r.1  102589240  transcription factor TCP8 
 sot-r.1  102602611  transcription factor TCP23-like 
 sot-r.1  102597862  transcription factor TCP8 
 nta-r.1  107826452  transcription factor TCP23-like 
 nta-r.1  107819025  transcription factor TCP22-like 
 nta-r.1  107818734  transcription factor TCP23 
 zma-u.5  103650647  transcription factor PCF3 
 zma-u.5  100384575  uncharacterized LOC100384575 
 tae-r.2  123102928  transcription factor PCF3 
 tae-r.2  123111027  transcription factor PCF3 
 tae-r.2  123120088  transcription factor PCF3 
 hvu-r.1  123397118  transcription factor PCF3-like 
 bdi-r.1  100827829  transcription factor PCF3 

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Top 50 coexpressed genes to 107925442 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107925442 (ghi-r.1 coexpression data)

CoexMap"107925442"


ghiLOC107925442 | Entrez gene ID : 107925442
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta zma tae hvu bdi cre osa sbi
Paralog 4 3 3 3 1 2 2 3 1 3 3 3 2 3 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (1947 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_040969234.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_040969234.1)
Subcellular
localization
TargetP
chlo 8,  other 4  (predict for XP_040969234.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107925442


ghi-r.1
for
107938762


ghi-r.1
for
107922196


ghi-r.1
for
107904889


ath-u.5
for
AT1G35560


ath-u.5
for
TCP8


ath-u.5
for
AT1G72010


bra-r.6
for
103838634


bra-r.6
for
103831715


bra-r.6
for
103852745


bna-r.1
for
106355943


bna-r.1
for
106395841


bna-r.1
for
111212898


cit-r.1
for
102609553


gma-u.5
for
100814151


gma-u.5
for
100812983


vvi-u.5
for
100266605


vvi-u.5
for
100243917


ppo-u.5
for
7475796


ppo-u.5
for
18104436


ppo-u.5
for
18098300


mtr-u.5
for
11424191


sly-u.5
for
TCP11


sly-u.5
for
TCP13


sly-u.5
for
TCP12


sot-r.1
for
102589240


sot-r.1
for
102602611


sot-r.1
for
102597862


nta-r.1
for
107826452


nta-r.1
for
107819025


nta-r.1
for
107818734


zma-u.5
for
103650647


zma-u.5
for
100384575


tae-r.2
for
123102928


tae-r.2
for
123111027


tae-r.2
for
123120088


hvu-r.1
for
123397118


bdi-r.1
for
100827829



Ortholog ID: 4006
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit gma gma vvi vvi ppo ppo ppo mtr sly sly sly sot sot sot nta nta nta zma zma tae tae tae hvu bdi
Symbol LOC107922196 LOC107904889 LOC107898697 AT1G35560 TCP8 AT1G72010 LOC103838634 LOC103831715 LOC103852745 LOC111212898 LOC106395414 LOC106376817 LOC102609553 LOC100814151 LOC100812983 LOC100266605 LOC100243917 LOC7475796 LOC18104436 LOC18098300 LOC11424191 TCP11 TCP13 TCP12 LOC102589240 LOC102602611 LOC102597862 LOC107826452 LOC107819025 LOC107831606 LOC103650647 LOC100384575 LOC123102928 LOC123111027 LOC123120088 LOC123397118 LOC100827829
Function* transcription factor TCP8 transcription factor TCP23 transcription factor TCP8 TCP family transcription factor TCP family transcription factor TCP family transcription factor transcription factor TCP8 transcription factor TCP22 transcription factor TCP22 transcription factor TCP8 transcription factor TCP22-like transcription factor TCP22-like transcription factor TCP8 transcription factor TCP8 transcription factor TCP8 transcription factor TCP8 transcription factor TCP8 transcription factor TCP23 transcription factor TCP23 transcription factor TCP8 transcription factor TCP8 TCP transcription factor 11 TCP transcription factor 13 TCP transcription factor 12 transcription factor TCP8 transcription factor TCP23-like transcription factor TCP8 transcription factor TCP23-like transcription factor TCP22-like transcription factor TCP8 transcription factor PCF3 uncharacterized LOC100384575 transcription factor PCF3 transcription factor PCF3 transcription factor PCF3 transcription factor PCF3-like transcription factor PCF3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 5
nta04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107922196 107904889 107898697 840452 842177 843532 103838634 103831715 103852745 111212898 106395414 106376817 102609553 100814151 100812983 100266605 100243917 7475796 18104436 18098300 11424191 100736247 100736549 100736519 102589240 102602611 102597862 107826452 107819025 107831606 103650647 100384575 123102928 123111027 123120088 123397118 100827829
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