ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-r.6	MBP15	MADS-box transcription factor MBP15
sly-u.5	MBP15	MADS-box transcription factor MBP15
sly-m.5	MBP15	MADS-box transcription factor MBP15
sly-u.5	101250404	agamous-like MADS-box protein AGL27
sly-u.5	101247413	MADS-box transcription factor
sot-r.1	102605812	truncated transcription factor CAULIFLOWER A-like
sot-r.1	102605245	protein MADS AFFECTING FLOWERING 5-like
sot-r.1	102593535	agamous-like MADS-box protein AGL27
nta-r.1	107761984	agamous-like MADS-box protein AGL27
nta-r.1	107830078	agamous-like MADS-box protein AGL27
nta-r.1	107824723	agamous-like MADS-box protein AGL27
ath-u.5	AGL31	AGAMOUS-like 31
ath-u.5	MAF3	K-box region and MADS-box transcription factor family protein
gma-u.5	AGL3L	agamous-like MADS-box protein AGL3-like
gma-u.5	100804540	MADS-box protein FLOWERING LOCUS C
bra-r.6	103850339	MADS-box protein FLOWERING LOCUS C
bra-r.6	103855272	agamous-like MADS-box protein AGL27
bra-r.6	103855273	protein MADS AFFECTING FLOWERING 5
vvi-u.5	100241171	MADS-box transcription factor 18
vvi-u.5	FLC	flowering locus C
ppo-u.5	7460555	MADS-box protein EJ2
ppo-u.5	7456243	truncated transcription factor CAULIFLOWER A
ppo-u.5	18097112	MADS-box transcription factor 14
bna-r.1	106382847	agamous-like MADS-box protein AGL27
bna-r.1	106382850	agamous-like MADS-box protein AGL27
cit-r.1	102618544	agamous-like MADS-box protein MADS2

Annotation

functional annotation

KEGG

GO BP

GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II

(133 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(2947 genes)

IEA

GO MF

GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding	(282 genes)	IEA
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific	(326 genes)	IEA
GO:0046983 [list] [network] protein dimerization activity	(499 genes)	IEA

Protein

NP_001352611.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, mito 1, plas 1, mito_plas 1

(predict for NP_001352611.1)

Subcellular
localization
TargetP

other 8

(predict for NP_001352611.1)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-r.6 for MBP15	sly-u.5 for MBP15	sly-m.5 for MBP15	sly-u.5 for 101250404	sly-u.5 for 101247413	sot-r.1 for 102605812	sot-r.1 for 102605245	sot-r.1 for 102593535	nta-r.1 for 107761984	nta-r.1 for 107830078	nta-r.1 for 107824723	ath-u.5 for AGL31	ath-u.5 for MAF3	gma-u.5 for AGL3L	gma-u.5 for 100804540	bra-r.6 for 103850339	bra-r.6 for 103855272	bra-r.6 for 103855273	vvi-u.5 for 100241171	vvi-u.5 for FLC	ppo-u.5 for 7460555	ppo-u.5 for 7456243	ppo-u.5 for 18097112	bna-r.1 for 106382847	bna-r.1 for 106382850	cit-r.1 for 102618544