ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123078968	replication stress response regulator SDE2
tae-r.2	123061866	replication stress response regulator SDE2
tae-r.2	123070561	replication stress response regulator SDE2
hvu-r.1	123444120	replication stress response regulator SDE2
bdi-r.1	100840006	replication stress response regulator SDE2
osa-u.5	4324395	uncharacterized LOC4324395
zma-u.5	100191811	Ubiquitin-like superfamily protein
zma-u.5	100194279	Ubiquitin-like superfamily protein
sbi-r.1	110433829	protein SDE2 homolog
ath-u.5	AT3G06455	ubiquitin family protein
ath-u.5	AT4G01000	Ubiquitin-like superfamily protein
gma-u.5	100799364	replication stress response regulator SDE2
gma-u.5	100781694	replication stress response regulator SDE2
sly-u.5	101247169	uncharacterized LOC101247169
bra-r.6	103836862	replication stress response regulator SDE2
bra-r.6	103858825	replication stress response regulator SDE2
vvi-u.5	100255081	uncharacterized LOC100255081
ppo-u.5	7494149	uncharacterized LOC7494149
ppo-u.5	7497246	uncharacterized LOC7497246
mtr-u.5	11431773	replication stress response regulator SDE2
ghi-r.1	107945861	replication stress response regulator SDE2
ghi-r.1	107948177	replication stress response regulator SDE2-like
ghi-r.1	107938161	replication stress response regulator SDE2
bna-r.1	106438633	replication stress response regulator SDE2-like
bna-r.1	106388762	replication stress response regulator SDE2-like
bna-r.1	106365733	replication stress response regulator SDE2-like
sot-r.1	102578820	protein SDE2 homolog
cit-r.1	127901093	uncharacterized LOC127901093
cit-r.1	102619656	uncharacterized LOC102619656
nta-r.1	107792884	uncharacterized LOC107792884
nta-r.1	107813826	uncharacterized LOC107813826

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(8281 genes)

IEA

GO MF

Protein

XP_044357568.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, nucl 2, nucl_plas 2

(predict for XP_044357568.1)

Subcellular
localization
TargetP

mito 8

(predict for XP_044357568.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123078968	tae-r.2 for 123061866	tae-r.2 for 123070561	hvu-r.1 for 123444120	bdi-r.1 for 100840006	osa-u.5 for 4324395	zma-u.5 for 100191811	zma-u.5 for 100194279	sbi-r.1 for 110433829	ath-u.5 for AT3G06455	ath-u.5 for AT4G01000	gma-u.5 for 100799364	gma-u.5 for 100781694	sly-u.5 for 101247169	bra-r.6 for 103836862	bra-r.6 for 103858825	vvi-u.5 for 100255081	ppo-u.5 for 7494149	ppo-u.5 for 7497246	mtr-u.5 for 11431773	ghi-r.1 for 107945861	ghi-r.1 for 107948177	ghi-r.1 for 107938161	bna-r.1 for 106438633	bna-r.1 for 106388762	bna-r.1 for 106365733	sot-r.1 for 102578820	cit-r.1 for 127901093	cit-r.1 for 102619656	nta-r.1 for 107792884	nta-r.1 for 107813826

Ortholog

Ortholog ID: 6539

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

replication stress response regulator SDE2

uncharacterized LOC4324395

Ubiquitin-like superfamily protein

protein SDE2 homolog

ubiquitin family protein

Ubiquitin-like superfamily protein

replication stress response regulator SDE2

uncharacterized LOC101247169

replication stress response regulator SDE2

uncharacterized LOC100255081

uncharacterized LOC7494149

uncharacterized LOC7497246

replication stress response regulator SDE2

replication stress response regulator SDE2-like

protein SDE2 homolog

uncharacterized LOC127901093

uncharacterized LOC102619656

uncharacterized LOC107792884

uncharacterized LOC107813826

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	4
tae03015	mRNA surveillance pathway	3
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4
tae03015	mRNA surveillance pathway	3
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	4
tae03015	mRNA surveillance pathway	3
tae03040	Spliceosome	3
tae04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	2
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	6
zma04120	Ubiquitin mediated proteolysis	4
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4
gma03015	mRNA surveillance pathway	2
gma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	2
gma03250	Viral life cycle - HIV-1	2
gma03083	Polycomb repressive complex	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	5
ghi03015	mRNA surveillance pathway	2
ghi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	6

Expression

Expression pattern

Entrez Gene ID^*

123078968

123061866

123070561

123444120

100840006

4324395

100191811

100194279

110433829

819822

826414

100799364

100781694

101247169

103836862

103858825

100255081

7494149

7497246

11431773

107945861

107938161

107900946

106388762

106365733

125577650

102578820

127901093

102619656

107792884

107813826

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123078968 (tae-r.2 coexpression data)

Top 50 enrichment test to 123078968 (tae-r.2 coexpression data)


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	1	1	2	1	2	2	1	2	1	2	1	3	3	1	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123078968 (tae-r.2 coexpression data)

Top 50 enrichment test to 123078968 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**