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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123159924   nuclear intron maturase 3, mitochondrial 
 tae-r.2   123168959   nuclear intron maturase 3, mitochondrial 
 hvu-r.1   123412494   nuclear intron maturase 3, mitochondrial-like 
 hvu-r.1   123449772   nuclear intron maturase 3, mitochondrial-like 
 bdi-r.1   100827431   nuclear intron maturase 3, mitochondrial 
 zma-u.5   103629684   RNA-directed DNA polymerase (reverse transcriptase) 
 sbi-r.1   8069370   uncharacterized LOC8069370 
 ath-u.5   AT5G04050   RNA-directed DNA polymerase (reverse transcriptase) 
 gma-u.5   112999758   nuclear intron maturase 3, mitochondrial 
 gma-u.5   100812449   nuclear intron maturase 3, mitochondrial 
 sly-u.5   101246113   nuclear intron maturase 3, mitochondrial 
 bra-r.6   103847334   nuclear intron maturase 3, mitochondrial 
 vvi-u.5   100264128   nuclear intron maturase 3, mitochondrial 
 ppo-u.5   112327903   nuclear intron maturase 3, mitochondrial 
 mtr-u.5   112422855   nuclear intron maturase 3, mitochondrial 
 mtr-u.5   112421304   nuclear intron maturase 3, mitochondrial 
 ghi-r.1   107892540   nuclear intron maturase 3, mitochondrial 
 ghi-r.1   107889395   nuclear intron maturase 3, mitochondrial-like 
 bna-r.1   106372667   nuclear intron maturase 3, mitochondrial 
 bna-r.1   106372516   nuclear intron maturase 3, mitochondrial 
 sot-r.1   102587557   uncharacterized LOC102587557 
 cit-r.1   102607317   nuclear intron maturase 3, mitochondrial 
 nta-r.1   107800159   nuclear intron maturase 3, mitochondrial 
 nta-r.1   107766291   nuclear intron maturase 3, mitochondrial-like 

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Top 50 coexpressed genes to 123159924 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123159924 (tae-r.2 coexpression data)

CoexMap""


taeLOC123159924 | Entrez gene ID : 123159924    
Species tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre osa
Paralog 2 2 1 1 1 1 2 1 1 1 1 2 2 2 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function nuclear intron maturase 3, mitochondrial
KEGG
GO BP
GO:0006315 [list] [network] homing of group II introns  (5 genes)  IEA  
GO:0090615 [list] [network] mitochondrial mRNA processing  (5 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1872 genes)  IEA  
GO MF
GO:0003964 [list] [network] RNA-directed DNA polymerase activity  (8 genes)  IEA  
Protein XP_044433664.1 [sequence] [blastp]
XP_044433665.1 [sequence] [blastp]
XP_044433666.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 3,  cyto_mito 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_044433664.1)
chlo 5,  mito 3,  cyto_mito 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_044433665.1)
chlo 5,  mito 3,  cyto_mito 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_044433666.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_044433664.1)
mito 6  (predict for XP_044433665.1)
mito 6  (predict for XP_044433666.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123159924
tae-r.2
for
123168959
hvu-r.1
for
123412494
hvu-r.1
for
123449772
bdi-r.1
for
100827431
zma-u.5
for
103629684
sbi-r.1
for
8069370
ath-u.5
for
AT5G04050
gma-u.5
for
112999758
gma-u.5
for
100812449
sly-u.5
for
101246113
bra-r.6
for
103847334
vvi-u.5
for
100264128
ppo-u.5
for
112327903
mtr-u.5
for
112422855
mtr-u.5
for
112421304
ghi-r.1
for
107892540
ghi-r.1
for
107889395
bna-r.1
for
106372667
bna-r.1
for
106372516
sot-r.1
for
102587557
cit-r.1
for
102607317
nta-r.1
for
107800159
nta-r.1
for
107766291

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Ortholog ID: 10271
Species tae tae hvu hvu bdi zma sbi ath gma gma sly bra vvi ppo mtr mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123159924 LOC123168959 LOC123412494 LOC123449772 LOC100827431 LOC103629684 LOC8069370 AT5G04050 LOC112999758 LOC100812449 LOC101246113 LOC103847334 LOC100264128 LOC112327903 LOC112422855 LOC112421304 LOC107892540 LOC107889395 LOC106372667 LOC106372516 LOC102587557 LOC102607317 LOC107800159 LOC107766291
Function* nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial-like nuclear intron maturase 3, mitochondrial-like nuclear intron maturase 3, mitochondrial RNA-directed DNA polymerase (reverse transcriptase) uncharacterized LOC8069370 RNA-directed DNA polymerase (reverse transcriptase) nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial-like nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial uncharacterized LOC102587557 nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03440 Homologous recombination 2
nta03450 Non-homologous end-joining 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123159924 123168959 123412494 123449772 100827431 103629684 8069370 830284 112999758 100812449 101246113 103847334 100264128 112327903 112422855 112421304 107892540 107889395 106372667 106372516 102587557 102607317 107800159 107766291
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