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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   MCCB   3-methylcrotonyl-CoA carboxylase 
 ath-u.5   MCCB   3-methylcrotonyl-CoA carboxylase 
 ath-r.7   MCCB   3-methylcrotonyl-CoA carboxylase 
 ath-m.9   MCCB   3-methylcrotonyl-CoA carboxylase 
 ath-e.2   MCCB   3-methylcrotonyl-CoA carboxylase 
 ath-m.4.hor   MCCB   3-methylcrotonyl-CoA carboxylase 
 ath-m.4.lig   MCCB   3-methylcrotonyl-CoA carboxylase 
 ath-m.4.str   MCCB   3-methylcrotonyl-CoA carboxylase 
 ath-m.4.tis   MCCB   3-methylcrotonyl-CoA carboxylase 
 bra-r.6   103862316   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 bra-r.6   103834444   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 bna-r.1   106436706   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 bna-r.1   106361054   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like 
 bna-r.1   106361079   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 ghi-r.1   107953393   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 ghi-r.1   107938005   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 cit-r.1   102619146   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 gma-u.5   100791763   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 gma-u.5   100777651   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 vvi-u.5   100253805   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 ppo-u.5   7457538   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 mtr-u.5   11446438   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 sly-u.5   101262668   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 sot-r.1   102589983   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 nta-r.1   107776091   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 nta-r.1   107782183   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 osa-u.5   4345605   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 zma-u.5   100281617   uncharacterized LOC100281617 
 tae-r.2   123164970   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 tae-r.2   123148371   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 tae-r.2   123088070   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 hvu-r.1   123408126   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 sbi-r.1   8075626   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 bdi-r.1   100826561   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 cre-r.1   CHLRE_03g181200v5   3-methylcrotonyl-CoA carboxylase 

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Top 50 coexpressed genes to MCCB (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MCCB (ath-m.4.bio coexpression data)

CoexMap"829549"


athMCCB | Entrez gene ID : 829549      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00280 [list] [network] Valine, leucine and isoleucine degradation (52 genes)
GO BP
GO:0006552 [list] [network] L-leucine catabolic process  (5 genes)  IDA  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA IDA ISM TAS  
GO MF
GO:0050897 [list] [network] cobalt ion binding  (44 genes)  HDA  
GO:0008270 [list] [network] zinc ion binding  (391 genes)  HDA  
Protein NP_567950.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 3  (predict for NP_567950.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_567950.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
MCCB
ath-u.5
for
MCCB
ath-r.7
for
MCCB
ath-m.9
for
MCCB
ath-e.2
for
MCCB
ath-m.4.hor
for
MCCB
ath-m.4.lig
for
MCCB
ath-m.4.str
for
MCCB
ath-m.4.tis
for
MCCB
bra-r.6
for
103862316
bra-r.6
for
103834444
bna-r.1
for
106436706
bna-r.1
for
106361054
bna-r.1
for
106361079
ghi-r.1
for
107953393
ghi-r.1
for
107938005
cit-r.1
for
102619146
gma-u.5
for
100791763
gma-u.5
for
100777651
vvi-u.5
for
100253805
ppo-u.5
for
7457538
mtr-u.5
for
11446438
sly-u.5
for
101262668
sot-r.1
for
102589983
nta-r.1
for
107776091
nta-r.1
for
107782183
osa-u.5
for
4345605
zma-u.5
for
100281617
tae-r.2
for
123164970
tae-r.2
for
123148371
tae-r.2
for
123088070
hvu-r.1
for
123408126
sbi-r.1
for
8075626
bdi-r.1
for
100826561
cre-r.1
for
CHLRE_03g181200v5


Ortholog ID: 8575
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol MCCB LOC103862316 LOC103834444 LOC106436706 LOC106361054 LOC106441143 LOC107953393 LOC107938005 LOC102619146 LOC100791763 LOC100777651 LOC100253805 LOC7457538 LOC11446438 LOC101262668 LOC102589983 LOC107776091 LOC107782183 LOC4345605 LOC100281617 LOC123164970 LOC123148371 LOC123088070 LOC123408126 LOC8075626 LOC100826561 CHLRE_03g181200v5
Function* 3-methylcrotonyl-CoA carboxylase methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial uncharacterized LOC100281617 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 3-methylcrotonyl-CoA carboxylase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 9
ath00640 Propanoate metabolism 5
ath00410 beta-Alanine metabolism 3
ath00785 Lipoic acid metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 7
bra01200 Carbon metabolism 5
bra00640 Propanoate metabolism 4
bra00410 beta-Alanine metabolism 4
bra01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 6
bra01200 Carbon metabolism 5
bra01210 2-Oxocarboxylic acid metabolism 4
bra00640 Propanoate metabolism 3
bra00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00280 Valine, leucine and isoleucine degradation 8
bna00640 Propanoate metabolism 2
bna00785 Lipoic acid metabolism 2
bna01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00280 Valine, leucine and isoleucine degradation 10
bna00640 Propanoate metabolism 4
bna00785 Lipoic acid metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00280 Valine, leucine and isoleucine degradation 10
bna00640 Propanoate metabolism 4
bna00785 Lipoic acid metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 7
ghi00280 Valine, leucine and isoleucine degradation 7
ghi00380 Tryptophan metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 5
ghi04146 Peroxisome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 7
ghi00280 Valine, leucine and isoleucine degradation 7
ghi00380 Tryptophan metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 5
ghi04146 Peroxisome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00280 Valine, leucine and isoleucine degradation 3
cit03010 Ribosome 2
cit00650 Butanoate metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 7
gma00640 Propanoate metabolism 3
gma00785 Lipoic acid metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 7
gma00640 Propanoate metabolism 2
gma00785 Lipoic acid metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00280 Valine, leucine and isoleucine degradation 4
vvi00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 4
ppo00520 Amino sugar and nucleotide sugar metabolism 4
ppo01250 Biosynthesis of nucleotide sugars 4
ppo01200 Carbon metabolism 3
ppo00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 5
mtr00350 Tyrosine metabolism 4
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
mtr00360 Phenylalanine metabolism 3
mtr01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00052 Galactose metabolism 3
sly00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 7
sot00310 Lysine degradation 3
sot01210 2-Oxocarboxylic acid metabolism 3
sot00500 Starch and sucrose metabolism 2
sot00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 8
nta00052 Galactose metabolism 4
nta00260 Glycine, serine and threonine metabolism 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 6
nta00310 Lysine degradation 4
nta00052 Galactose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 9
osa00640 Propanoate metabolism 5
osa01200 Carbon metabolism 3
osa00410 beta-Alanine metabolism 3
osa00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 10
zma01210 2-Oxocarboxylic acid metabolism 5
zma00640 Propanoate metabolism 3
zma01200 Carbon metabolism 3
zma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 13
tae00640 Propanoate metabolism 3
tae00785 Lipoic acid metabolism 3
tae01210 2-Oxocarboxylic acid metabolism 3
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 13
tae00640 Propanoate metabolism 3
tae00785 Lipoic acid metabolism 3
tae01210 2-Oxocarboxylic acid metabolism 3
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 15
tae00640 Propanoate metabolism 4
tae00785 Lipoic acid metabolism 4
tae01210 2-Oxocarboxylic acid metabolism 4
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 11
hvu00640 Propanoate metabolism 5
hvu01210 2-Oxocarboxylic acid metabolism 4
hvu00071 Fatty acid degradation 3
hvu00410 beta-Alanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 7
bdi00640 Propanoate metabolism 4
bdi01200 Carbon metabolism 4
bdi00330 Arginine and proline metabolism 3
bdi00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00280 Valine, leucine and isoleucine degradation 3
cre00350 Tyrosine metabolism 3
cre00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cre00360 Phenylalanine metabolism 2
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829549 103862316 103834444 106436706 106361054 106441143 107953393 107938005 102619146 100791763 100777651 100253805 7457538 11446438 101262668 102589983 107776091 107782183 4345605 100281617 123164970 123148371 123088070 123408126 8075626 100826561 5728448
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