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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100265403   pentatricopeptide repeat-containing protein At1g71490 
 vvi-r.5   100265403   pentatricopeptide repeat-containing protein At1g71490 
 ath-u.5   AT1G22830   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT1G71490   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100782216   pentatricopeptide repeat-containing protein At1g71490 
 gma-u.5   100803016   pentatricopeptide repeat-containing protein At1g71490 
 bra-r.6   103840825   pentatricopeptide repeat-containing protein At1g22830 
 bra-r.6   103830844   pentatricopeptide repeat-containing protein At1g71490 
 ppo-u.5   112325318   pentatricopeptide repeat-containing protein At1g71490 
 mtr-u.5   11427461   pentatricopeptide repeat-containing protein At1g71490 
 ghi-r.1   121213744   pentatricopeptide repeat-containing protein At1g71490 
 ghi-r.1   121203757   pentatricopeptide repeat-containing protein At1g71490 
 bna-r.1   106429772   pentatricopeptide repeat-containing protein At1g22830 
 bna-r.1   106397736   pentatricopeptide repeat-containing protein At1g22830-like 
 bna-r.1   106397269   pentatricopeptide repeat-containing protein At1g71490 
 cit-r.1   102616106   pentatricopeptide repeat-containing protein At1g71490 
 sly-u.5   101252526   pentatricopeptide repeat-containing protein At1g71490 
 sot-r.1   102597038   pentatricopeptide repeat-containing protein At1g71490-like 
 sot-r.1   102604752   pentatricopeptide repeat-containing protein At1g71490-like 
 nta-r.1   107790853   pentatricopeptide repeat-containing protein At1g71490 
 nta-r.1   107817792   pentatricopeptide repeat-containing protein At1g71490-like 
 osa-u.5   9266464   pentatricopeptide repeat-containing protein At1g71490 
 zma-u.5   103647267   pentatricopeptide repeat-containing protein At1g71490 
 tae-r.2   123168091   pentatricopeptide repeat-containing protein At1g71490 
 tae-r.2   123149114   pentatricopeptide repeat-containing protein At1g71490 
 hvu-r.1   123411763   pentatricopeptide repeat-containing protein At1g71490-like 
 bdi-r.1   104581278   pentatricopeptide repeat-containing protein At1g71490 

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Top 50 coexpressed genes to 100265403 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100265403 (vvi-u.5 coexpression data)

CoexMap"100265403"


vviLOC100265403 | Entrez gene ID : 100265403      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu bdi cre sbi
Paralog 2 2 2 2 1 1 2 3 1 1 2 2 1 1 2 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010645901.1 [sequence] [blastp]
XP_010645902.1 [sequence] [blastp]
XP_010645903.1 [sequence] [blastp]
XP_019073462.1 [sequence] [blastp]
XP_059590312.1 [sequence] [blastp]
XP_059590313.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 1,  mito 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1,  mito_plas 1  (predict for XP_010645901.1)
chlo 4,  cyto 3,  nucl 1,  mito 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1,  mito_plas 1  (predict for XP_010645902.1)
chlo 4,  cyto 3,  nucl 1,  mito 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1,  mito_plas 1  (predict for XP_010645903.1)
chlo 4,  cyto 3,  nucl 1,  mito 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1,  mito_plas 1  (predict for XP_019073462.1)
chlo 4,  cyto 3,  nucl 1,  mito 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1,  mito_plas 1  (predict for XP_059590312.1)
chlo 4,  cyto 3,  nucl 1,  mito 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1,  mito_plas 1  (predict for XP_059590313.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_010645901.1)
other 5,  mito 4  (predict for XP_010645902.1)
other 5,  mito 4  (predict for XP_010645903.1)
other 5,  mito 4  (predict for XP_019073462.1)
other 5,  mito 4  (predict for XP_059590312.1)
other 5,  mito 4  (predict for XP_059590313.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100265403
vvi-r.5
for
100265403
ath-u.5
for
AT1G22830
ath-u.5
for
AT1G71490
gma-u.5
for
100782216
gma-u.5
for
100803016
bra-r.6
for
103840825
bra-r.6
for
103830844
ppo-u.5
for
112325318
mtr-u.5
for
11427461
ghi-r.1
for
121213744
ghi-r.1
for
121203757
bna-r.1
for
106429772
bna-r.1
for
106397736
bna-r.1
for
106397269
cit-r.1
for
102616106
sly-u.5
for
101252526
sot-r.1
for
102597038
sot-r.1
for
102604752
nta-r.1
for
107790853
nta-r.1
for
107817792
osa-u.5
for
9266464
zma-u.5
for
103647267
tae-r.2
for
123168091
tae-r.2
for
123149114
hvu-r.1
for
123411763
bdi-r.1
for
104581278


Ortholog ID: 9227
Species vvi ath ath gma gma bra bra ppo mtr ghi ghi bna bna bna cit sly sot sot nta nta osa zma tae tae hvu bdi
Symbol LOC100265403 AT1G22830 AT1G71490 LOC100782216 LOC100803016 LOC103840825 LOC103830844 LOC112325318 LOC11427461 LOC121213744 LOC121203757 LOC106429772 LOC106397736 LOC106397269 LOC102616106 LOC101252526 LOC102597038 LOC102604752 LOC107790853 LOC107817792 LOC9266464 LOC103647267 LOC123168091 LOC123149114 LOC123411763 LOC104581278
Function* pentatricopeptide repeat-containing protein At1g71490 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g22830 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g22830 pentatricopeptide repeat-containing protein At1g22830-like pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490-like pentatricopeptide repeat-containing protein At1g71490-like pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490-like pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490-like pentatricopeptide repeat-containing protein At1g71490
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 3
ghi03040 Spliceosome 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 3
ghi03040 Spliceosome 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100265403 838888 843490 100782216 100803016 103840825 103830844 112325318 11427461 121213744 121203757 106429772 106397736 106397269 102616106 101252526 102597038 102604752 107790853 107817792 9266464 103647267 123168091 123149114 123411763 104581278
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