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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107790853   pentatricopeptide repeat-containing protein At1g71490 
 sly-u.5   101252526   pentatricopeptide repeat-containing protein At1g71490 
 ath-u.5   AT1G22830   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT1G71490   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100782216   pentatricopeptide repeat-containing protein At1g71490 
 gma-u.5   100803016   pentatricopeptide repeat-containing protein At1g71490 
 vvi-u.5   100265403   pentatricopeptide repeat-containing protein At1g71490 
 ppo-u.5   112325318   pentatricopeptide repeat-containing protein At1g71490 
 mtr-u.5   11427461   pentatricopeptide repeat-containing protein At1g71490 
 osa-u.5   9266464   pentatricopeptide repeat-containing protein At1g71490 
 zma-u.5   103647267   pentatricopeptide repeat-containing protein At1g71490 

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Top 50 coexpressed genes to 107790853 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107790853 (nta-r.1 coexpression data)

CoexMap"107790853"


ntaLOC107790853 | Entrez gene ID : 107790853      
Species nta sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi tae cre sot
Paralog 1 1 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016468306.2 [sequence] [blastp]
XP_016468314.2 [sequence] [blastp]
XP_016468319.2 [sequence] [blastp]
XP_016468327.2 [sequence] [blastp]
XP_016468335.2 [sequence] [blastp]
XP_016468343.2 [sequence] [blastp]
XP_016468348.2 [sequence] [blastp]
XP_016468359.2 [sequence] [blastp]
XP_075108337.1 [sequence] [blastp]
XP_075108338.1 [sequence] [blastp]
XP_075108339.1 [sequence] [blastp]
XP_075108340.1 [sequence] [blastp]
XP_075108341.1 [sequence] [blastp]
XP_075108342.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1  (predict for XP_016468306.2)
chlo 7,  nucl 1,  mito 1  (predict for XP_016468314.2)
chlo 7,  nucl 1,  mito 1  (predict for XP_016468319.2)
chlo 7,  nucl 1,  mito 1  (predict for XP_016468327.2)
chlo 7,  nucl 1,  mito 1  (predict for XP_016468335.2)
chlo 7,  nucl 1,  mito 1  (predict for XP_016468343.2)
chlo 7,  nucl 1,  mito 1  (predict for XP_016468348.2)
chlo 7,  nucl 1,  mito 1  (predict for XP_016468359.2)
chlo 7,  nucl 1,  mito 1  (predict for XP_075108337.1)
chlo 7,  nucl 1,  mito 1  (predict for XP_075108338.1)
chlo 7,  nucl 1,  mito 1  (predict for XP_075108339.1)
chlo 7,  nucl 1,  mito 1  (predict for XP_075108340.1)
chlo 7,  nucl 1,  mito 1  (predict for XP_075108341.1)
chlo 7,  nucl 1,  mito 1  (predict for XP_075108342.1)
Subcellular
localization
TargetP
mito 5,  chlo 4  (predict for XP_016468306.2)
mito 5,  chlo 4  (predict for XP_016468314.2)
mito 5,  chlo 4  (predict for XP_016468319.2)
mito 5,  chlo 4  (predict for XP_016468327.2)
mito 5,  chlo 4  (predict for XP_016468335.2)
mito 5,  chlo 4  (predict for XP_016468343.2)
mito 5,  chlo 4  (predict for XP_016468348.2)
mito 5,  chlo 4  (predict for XP_016468359.2)
mito 5,  chlo 4  (predict for XP_075108337.1)
mito 5,  chlo 4  (predict for XP_075108338.1)
mito 5,  chlo 4  (predict for XP_075108339.1)
mito 5,  chlo 4  (predict for XP_075108340.1)
mito 5,  chlo 4  (predict for XP_075108341.1)
mito 5,  chlo 4  (predict for XP_075108342.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107790853
sly-u.5
for
101252526
ath-u.5
for
AT1G22830
ath-u.5
for
AT1G71490
gma-u.5
for
100782216
gma-u.5
for
100803016
vvi-u.5
for
100265403
ppo-u.5
for
112325318
mtr-u.5
for
11427461
osa-u.5
for
9266464
zma-u.5
for
103647267


Ortholog ID: 9227
Species nta nta sly sot sot ath ath gma gma bra bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu bdi
Symbol LOC107790853 LOC107817792 LOC101252526 LOC102597038 LOC102604752 AT1G71490 AT1G22830 LOC100782216 LOC100803016 LOC103840825 LOC103830844 LOC100265403 LOC112325318 LOC11427461 LOC121203757 LOC121213744 LOC106397736 LOC106429772 LOC102616106 LOC9266464 LOC103647267 LOC123149114 LOC123168091 LOC123411763 LOC104581278
Function* pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490-like pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490-like pentatricopeptide repeat-containing protein At1g71490-like Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g22830 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g22830-like pentatricopeptide repeat-containing protein At1g22830 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490 pentatricopeptide repeat-containing protein At1g71490-like pentatricopeptide repeat-containing protein At1g71490
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 3
ghi03040 Spliceosome 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 3
ghi03040 Spliceosome 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107790853 107817792 101252526 102597038 102604752 843490 838888 100782216 100803016 103840825 103830844 100265403 112325318 11427461 121203757 121213744 106397736 106429772 102616106 9266464 103647267 123149114 123168091 123411763 104581278
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