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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100275629   uncharacterized LOC100275629 
 zma-r.6   100275629   uncharacterized LOC100275629 
 osa-u.5   107277503   pentatricopeptide repeat-containing protein At5g46100 
 tae-r.2   123070321   pentatricopeptide repeat-containing protein At5g46100 
 tae-r.2   123078781   pentatricopeptide repeat-containing protein At5g46100 
 tae-r.2   123061707   pentatricopeptide repeat-containing protein At5g46100 
 hvu-r.1   123444070   pentatricopeptide repeat-containing protein At5g46100 
 bdi-r.1   100830820   pentatricopeptide repeat-containing protein At5g46100 
 ath-u.5   AT5G46100   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100794116   pentatricopeptide repeat-containing protein At5g46100 
 sly-u.5   101248843   pentatricopeptide repeat-containing protein At5g46100 
 bra-r.6   103827756   pentatricopeptide repeat-containing protein At5g46100 
 bra-r.6   103853847   pentatricopeptide repeat-containing protein At5g46100 
 vvi-u.5   100249913   pentatricopeptide repeat-containing protein At5g46100 
 ppo-u.5   18103068   pentatricopeptide repeat-containing protein At5g46100 
 mtr-u.5   112419498   pentatricopeptide repeat-containing protein At5g46100 
 ghi-r.1   107941719   pentatricopeptide repeat-containing protein At5g46100 
 ghi-r.1   107916904   pentatricopeptide repeat-containing protein At5g46100 
 sot-r.1   102579726   pentatricopeptide repeat-containing protein At5g46100 
 cit-r.1   102607987   pentatricopeptide repeat-containing protein At5g46100 
 nta-r.1   107815136   pentatricopeptide repeat-containing protein At5g46100-like 
 nta-r.1   107760523   pentatricopeptide repeat-containing protein At5g46100-like 

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Top 50 coexpressed genes to 100275629 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100275629 (zma-u.5 coexpression data)

CoexMap"100275629"


zmaLOC100275629 | Entrez gene ID : 100275629      
Species zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi sot cit nta sbi bna cre
Paralog 2 1 3 1 1 1 1 1 2 1 1 1 2 1 1 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein XP_008654688.1 [sequence] [blastp]
XP_008654689.1 [sequence] [blastp]
XP_035817749.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  mito 1,  plas 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_008654688.1)
cyto 6,  chlo 1,  nucl 1,  mito 1,  plas 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_008654689.1)
cyto 6,  chlo 1,  nucl 1,  mito 1,  plas 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_035817749.1)
Subcellular
localization
TargetP
other 5  (predict for XP_008654688.1)
other 5  (predict for XP_008654689.1)
other 5  (predict for XP_035817749.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100275629
zma-r.6
for
100275629
osa-u.5
for
107277503
tae-r.2
for
123070321
tae-r.2
for
123078781
tae-r.2
for
123061707
hvu-r.1
for
123444070
bdi-r.1
for
100830820
ath-u.5
for
AT5G46100
gma-u.5
for
100794116
sly-u.5
for
101248843
bra-r.6
for
103827756
bra-r.6
for
103853847
vvi-u.5
for
100249913
ppo-u.5
for
18103068
mtr-u.5
for
112419498
ghi-r.1
for
107941719
ghi-r.1
for
107916904
sot-r.1
for
102579726
cit-r.1
for
102607987
nta-r.1
for
107815136
nta-r.1
for
107760523


Ortholog ID: 10982
Species zma osa tae tae tae hvu bdi ath gma sly bra bra vvi ppo mtr ghi ghi sot cit nta nta
Symbol LOC100275629 LOC107277503 LOC123070321 LOC123078781 LOC123061707 LOC123444070 LOC100830820 AT5G46100 LOC100794116 LOC101248843 LOC103827756 LOC103853847 LOC100249913 LOC18103068 LOC112419498 LOC107941719 LOC107916904 LOC102579726 LOC102607987 LOC107815136 LOC107760523
Function* uncharacterized LOC100275629 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100-like pentatricopeptide repeat-containing protein At5g46100-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100275629 107277503 123070321 123078781 123061707 123444070 100830820 834651 100794116 101248843 103827756 103853847 100249913 18103068 112419498 107941719 107916904 102579726 102607987 107815136 107760523
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