Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100794116   pentatricopeptide repeat-containing protein At5g46100 
 gma-r.7   100794116   pentatricopeptide repeat-containing protein At5g46100 
 mtr-u.5   112419498   pentatricopeptide repeat-containing protein At5g46100 
 ppo-u.5   18103068   pentatricopeptide repeat-containing protein At5g46100 
 ath-u.5   AT5G46100   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100249913   pentatricopeptide repeat-containing protein At5g46100 
 sly-u.5   101248843   pentatricopeptide repeat-containing protein At5g46100 
 osa-u.5   107277503   pentatricopeptide repeat-containing protein At5g46100 
 zma-u.5   100275629   uncharacterized LOC100275629 

close


Top 50 coexpressed genes to 100794116 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100794116 (gma-u.5 coexpression data)

CoexMap"100794116"


gmaLOC100794116 | Entrez gene ID : 100794116      
Species gma mtr ppo ath vvi sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_006594568.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  E.R. 1  (predict for XP_006594568.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_006594568.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100794116

.
gma-r.7
for
100794116

.
mtr-u.5
for
112419498

.
ppo-u.5
for
18103068

.
ath-u.5
for
AT5G46100

.
vvi-u.5
for
100249913

.
sly-u.5
for
101248843

.
osa-u.5
for
107277503

.
zma-u.5
for
100275629

.


Ortholog ID: 10982
Species ath gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi sot cit bdi nta nta
Symbol AT5G46100 LOC100794116 LOC101248843 LOC107277503 LOC100275629 LOC103853847 LOC103827756 LOC100249913 LOC18103068 LOC112419498 LOC123070321 LOC123078781 LOC123444070 LOC107941719 LOC107916904 LOC102579726 LOC102607987 LOC100830820 LOC107760523 LOC107815136
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 uncharacterized LOC100275629 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100-like pentatricopeptide repeat-containing protein At5g46100-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834651 100794116 101248843 107277503 100275629 103853847 103827756 100249913 18103068 112419498 123070321 123078781 123444070 107941719 107916904 102579726 102607987 100830820 107760523 107815136
The preparation time of this page was 0.1 [sec].