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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1  102607987  pentatricopeptide repeat-containing protein At5g46100 
 ath-u.5  AT5G46100  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  100794116  pentatricopeptide repeat-containing protein At5g46100 
 vvi-u.5  100249913  pentatricopeptide repeat-containing protein At5g46100 
 ppo-u.5  18103068  pentatricopeptide repeat-containing protein At5g46100 
 mtr-u.5  112419498  pentatricopeptide repeat-containing protein At5g46100 
 sly-u.5  101248843  pentatricopeptide repeat-containing protein At5g46100 
 osa-u.5  107277503  pentatricopeptide repeat-containing protein At5g46100 
 zma-u.5  100275629  uncharacterized LOC100275629 

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Top 50 coexpressed genes to 102607987 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102607987 (cit-r.1 coexpression data)

CoexMap"102607987"


citLOC102607987 | Entrez gene ID : 102607987
Species cit ath gma vvi ppo mtr sly osa zma bdi hvu bra bna sbi ghi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006467725.1 [sequence] [blastp]
XP_052291467.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 3  (predict for XP_006467725.1)
chlo 6,  chlo_mito 5,  mito 3  (predict for XP_052291467.1)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for XP_006467725.1)
mito 4,  other 3  (predict for XP_052291467.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cit-r.1
for
102607987


ath-u.5
for
AT5G46100


gma-u.5
for
100794116


vvi-u.5
for
100249913


ppo-u.5
for
18103068


mtr-u.5
for
112419498


sly-u.5
for
101248843


osa-u.5
for
107277503


zma-u.5
for
100275629



Ortholog ID: 10982
Species cit ath bra bra ghi ghi gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu bdi
Symbol LOC102607987 AT5G46100 LOC103853847 LOC103827756 LOC107941719 LOC107916904 LOC100794116 LOC100249913 LOC18103068 LOC112419498 LOC101248843 LOC102579726 LOC107760523 LOC107815136 LOC107277503 LOC100275629 LOC123070321 LOC123078781 LOC123444070 LOC100830820
Function* pentatricopeptide repeat-containing protein At5g46100 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100-like pentatricopeptide repeat-containing protein At5g46100-like pentatricopeptide repeat-containing protein At5g46100 uncharacterized LOC100275629 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100 pentatricopeptide repeat-containing protein At5g46100
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102607987 834651 103853847 103827756 107941719 107916904 100794116 100249913 18103068 112419498 101248843 102579726 107760523 107815136 107277503 100275629 123070321 123078781 123444070 100830820
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