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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100501385   uncharacterized LOC100501385 
 zma-r.6   100501385   uncharacterized LOC100501385 
 zma-m.5   100501385   uncharacterized LOC100501385 
 sbi-r.1   8065815   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 sbi-r.1   8083747   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 osa-u.5   4338505   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 tae-r.2   123128970   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 tae-r.2   123052651   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 hvu-r.1   123441159   TATA box-binding protein-associated factor RNA polymerase I subunit B-like 
 bdi-r.1   100826720   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 ath-u.5   MEE12   maternal effect embryo arrest 12 
 gma-u.5   100789168   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 sly-u.5   101254759   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 sly-u.5   101263451   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 bra-r.6   103843672   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 vvi-u.5   100241425   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 ppo-u.5   7492940   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 mtr-u.5   25492388   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 mtr-u.5   11437670   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 mtr-u.5   11419712   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 ghi-r.1   107904070   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 bna-r.1   106369255   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 sot-r.1   102596822   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 cit-r.1   102617299   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 nta-r.1   107774568   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 nta-r.1   107803844   TATA box-binding protein-associated factor RNA polymerase I subunit B-like 

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Top 50 coexpressed genes to 100501385 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100501385 (zma-u.5 coexpression data)

CoexMap"100501385"


zmaLOC100501385 | Entrez gene ID : 100501385      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 2 1 2 1 1 1 1 2 1 1 1 3 1 1 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001188 [list] [network] RNA polymerase I preinitiation complex assembly  (1 genes)  IEA  
GO:0042790 [list] [network] nucleolar large rRNA transcription by RNA polymerase I  (6 genes)  IEA  
GO CC
GO:0070860 [list] [network] RNA polymerase I core factor complex  (1 genes)  IEA  
GO MF
GO:0001164 [list] [network] RNA polymerase I core promoter sequence-specific DNA binding  (2 genes)  IEA  
Protein NP_001353854.1 [sequence] [blastp]
XP_035815705.1 [sequence] [blastp]
XP_035815706.1 [sequence] [blastp]
XP_035815707.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for NP_001353854.1)
nucl 7,  cyto 2  (predict for XP_035815705.1)
nucl 7,  cyto 2  (predict for XP_035815706.1)
nucl 7,  cyto 2  (predict for XP_035815707.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001353854.1)
other 9  (predict for XP_035815705.1)
other 9  (predict for XP_035815706.1)
other 9  (predict for XP_035815707.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100501385
zma-r.6
for
100501385
zma-m.5
for
100501385
sbi-r.1
for
8065815
sbi-r.1
for
8083747
osa-u.5
for
4338505
tae-r.2
for
123128970
tae-r.2
for
123052651
hvu-r.1
for
123441159
bdi-r.1
for
100826720
ath-u.5
for
MEE12
gma-u.5
for
100789168
sly-u.5
for
101254759
sly-u.5
for
101263451
bra-r.6
for
103843672
vvi-u.5
for
100241425
ppo-u.5
for
7492940
mtr-u.5
for
25492388
mtr-u.5
for
11437670
mtr-u.5
for
11419712
ghi-r.1
for
107904070
bna-r.1
for
106369255
sot-r.1
for
102596822
cit-r.1
for
102617299
nta-r.1
for
107774568
nta-r.1
for
107803844


Ortholog ID: 6797
Species zma sbi sbi osa tae hvu bdi ath gma sly sly bra vvi ppo mtr mtr mtr ghi bna sot cit nta nta
Symbol LOC100501385 LOC8065815 LOC8083747 LOC4338505 LOC123052651 LOC123441159 LOC100826720 MEE12 LOC100789168 LOC101254759 LOC101263451 LOC103843672 LOC100241425 LOC7492940 LOC25492388 LOC11437670 LOC11419712 LOC107904070 LOC106369255 LOC102596822 LOC102617299 LOC107774568 LOC107803844
Function* uncharacterized LOC100501385 TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B-like TATA box-binding protein-associated factor RNA polymerase I subunit B maternal effect embryo arrest 12 TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 3
sly00562 Inositol phosphate metabolism 3
sly04070 Phosphatidylinositol signaling system 3
sly04145 Phagosome 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 3
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100501385 8065815 8083747 4338505 123052651 123441159 100826720 814824 100789168 101254759 101263451 103843672 100241425 7492940 25492388 11437670 11419712 107904070 106369255 102596822 102617299 107774568 107803844
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