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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11419712   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 mtr-r.5   11419712   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 mtr-m.5   11419712   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 mtr-u.5   25492388   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 mtr-u.5   11437670   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 gma-u.5   100789168   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 ppo-u.5   7492940   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 ath-u.5   MEE12   maternal effect embryo arrest 12 
 vvi-u.5   100241425   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 sly-u.5   101254759   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 sly-u.5   101263451   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 osa-u.5   4338505   TATA box-binding protein-associated factor RNA polymerase I subunit B 
 zma-u.5   100501385   uncharacterized LOC100501385 

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Top 50 coexpressed genes to 11419712 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11419712 (mtr-u.5 coexpression data)

CoexMap"11419712"


mtrLOC11419712 | Entrez gene ID : 11419712      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001188 [list] [network] RNA polymerase I preinitiation complex assembly  (3 genes)  IEA  
GO:0042790 [list] [network] nucleolar large rRNA transcription by RNA polymerase I  (15 genes)  IEA  
GO CC
GO:0070860 [list] [network] RNA polymerase I core factor complex  (3 genes)  IEA  
GO MF
GO:0001164 [list] [network] RNA polymerase I core promoter sequence-specific DNA binding  (4 genes)  IEA  
Protein XP_024640676.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cysk 2,  nucl 1,  cysk_plas 1  (predict for XP_024640676.2)
Subcellular
localization
TargetP
scret 8,  other 3  (predict for XP_024640676.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11419712
mtr-r.5
for
11419712
mtr-m.5
for
11419712
mtr-u.5
for
25492388
mtr-u.5
for
11437670
gma-u.5
for
100789168
ppo-u.5
for
7492940
ath-u.5
for
MEE12
vvi-u.5
for
100241425
sly-u.5
for
101254759
sly-u.5
for
101263451
osa-u.5
for
4338505
zma-u.5
for
100501385


Ortholog ID: 6797
Species mtr mtr gma ppo ath bra vvi ghi bna cit sly sly sot nta nta osa zma hvu sbi sbi bdi
Symbol LOC11419712 LOC11437670 LOC100789168 LOC7492940 MEE12 LOC103843672 LOC100241425 LOC107904070 LOC106369255 LOC102617299 LOC101263451 LOC101254759 LOC102596822 LOC107774568 LOC107803844 LOC4338505 LOC100501385 LOC123441159 LOC8065815 LOC8083747 LOC100826720
Function* TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B maternal effect embryo arrest 12 TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B-like TATA box-binding protein-associated factor RNA polymerase I subunit B uncharacterized LOC100501385 TATA box-binding protein-associated factor RNA polymerase I subunit B-like TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 3
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 3
sly00562 Inositol phosphate metabolism 3
sly04070 Phosphatidylinositol signaling system 3
sly04145 Phagosome 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11419712 11437670 100789168 7492940 814824 103843672 100241425 107904070 106369255 102617299 101263451 101254759 102596822 107774568 107803844 4338505 100501385 123441159 8065815 8083747 100826720
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