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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103649923   DNA excision repair protein CSB 
 zma-r.6   103649923   DNA excision repair protein CSB 
 osa-u.5   CSB   DNA excision repair protein CSB-like 
 tae-r.2   123068696   DNA excision repair protein CSB 
 tae-r.2   123060201   DNA excision repair protein CSB 
 tae-r.2   123077208   DNA excision repair protein CSB 
 hvu-r.1   123442739   DNA excision repair protein CSB 
 bdi-r.1   100838784   DNA excision repair protein CSB 
 ath-u.5   CHR8   chromatin remodeling 8 
 gma-u.5   100820025   protein CHROMATIN REMODELING 8 
 sly-u.5   101252814   protein CHROMATIN REMODELING 8 
 bra-r.6   103861842   protein CHROMATIN REMODELING 8 
 vvi-u.5   100253251   protein CHROMATIN REMODELING 8 
 ppo-u.5   7476928   protein CHROMATIN REMODELING 8 
 mtr-u.5   25484243   protein CHROMATIN REMODELING 8 
 ghi-r.1   107920099   protein CHROMATIN REMODELING 8 
 ghi-r.1   107927455   protein CHROMATIN REMODELING 8 
 bna-r.1   106389776   protein CHROMATIN REMODELING 8 
 bna-r.1   106410369   protein CHROMATIN REMODELING 8 
 sot-r.1   102595123   protein CHROMATIN REMODELING 8 
 cit-r.1   102607652   protein CHROMATIN REMODELING 8 
 nta-r.1   107813734   DNA excision repair protein CSB 
 nta-r.1   107801393   protein CHROMATIN REMODELING 8 
 cre-r.1   CHLRE_06g270850v5   uncharacterized protein 

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Top 50 coexpressed genes to 103649923 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103649923 (zma-u.5 coexpression data)

CoexMap"103649923"


zmaLOC103649923 | Entrez gene ID : 103649923      
Species zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre sbi
Paralog 2 1 3 1 1 1 1 1 1 1 1 1 2 2 1 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03420 [list] [network] Nucleotide excision repair (94 genes)
GO BP
GO:0006283 [list] [network] transcription-coupled nucleotide-excision repair  (5 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0008094 [list] [network] ATP-dependent activity, acting on DNA  (145 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2473 genes)  IEA  
Protein XP_008673826.1 [sequence] [blastp]
XP_035822069.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for XP_008673826.1)
nucl 6,  cyto 4  (predict for XP_035822069.1)
Subcellular
localization
TargetP
other 9  (predict for XP_008673826.1)
other 9  (predict for XP_035822069.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103649923
zma-r.6
for
103649923
osa-u.5
for
CSB
tae-r.2
for
123068696
tae-r.2
for
123060201
tae-r.2
for
123077208
hvu-r.1
for
123442739
bdi-r.1
for
100838784
ath-u.5
for
CHR8
gma-u.5
for
100820025
sly-u.5
for
101252814
bra-r.6
for
103861842
vvi-u.5
for
100253251
ppo-u.5
for
7476928
mtr-u.5
for
25484243
ghi-r.1
for
107920099
ghi-r.1
for
107927455
bna-r.1
for
106389776
bna-r.1
for
106410369
sot-r.1
for
102595123
cit-r.1
for
102607652
nta-r.1
for
107813734
nta-r.1
for
107801393
cre-r.1
for
CHLRE_06g270850v5


Ortholog ID: 10658
Species zma osa tae tae tae hvu bdi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC103649923 CSB LOC123068696 LOC123060201 LOC123077208 LOC123442739 LOC100838784 CHR8 LOC100820025 LOC101252814 LOC103861842 LOC100253251 LOC7476928 LOC25484243 LOC107920099 LOC107927455 LOC106389776 LOC106410369 LOC102595123 LOC102607652 LOC107813734 LOC107801393 CHLRE_06g270850v5
Function* DNA excision repair protein CSB DNA excision repair protein CSB-like DNA excision repair protein CSB DNA excision repair protein CSB DNA excision repair protein CSB DNA excision repair protein CSB DNA excision repair protein CSB chromatin remodeling 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 DNA excision repair protein CSB protein CHROMATIN REMODELING 8 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03082 ATP-dependent chromatin remodeling 2
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 6
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 3
ath03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03420 Nucleotide excision repair 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03420 Nucleotide excision repair 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03420 Nucleotide excision repair 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103649923 4326441 123068696 123060201 123077208 123442739 100838784 816391 100820025 101252814 103861842 100253251 7476928 25484243 107920099 107927455 106389776 106410369 102595123 102607652 107813734 107801393 5721844
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