Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   CHR8   chromatin remodeling 8 
 ath-r.7   CHR8   chromatin remodeling 8 
 ath-m.9   CHR8   chromatin remodeling 8 
 ath-e.2   CHR8   chromatin remodeling 8 
 ath-m.4.bio   CHR8   chromatin remodeling 8 
 ath-m.4.hor   CHR8   chromatin remodeling 8 
 ath-m.4.lig   CHR8   chromatin remodeling 8 
 ath-m.4.str   CHR8   chromatin remodeling 8 
 ath-m.4.tis   CHR8   chromatin remodeling 8 
 gma-u.5   100820025   protein CHROMATIN REMODELING 8 
 vvi-u.5   100253251   protein CHROMATIN REMODELING 8 
 ppo-u.5   7476928   protein CHROMATIN REMODELING 8 
 mtr-u.5   25484243   protein CHROMATIN REMODELING 8 
 sly-u.5   101252814   protein CHROMATIN REMODELING 8 
 osa-u.5   CSB   DNA excision repair protein CSB-like 
 zma-u.5   103649923   DNA excision repair protein CSB 

close


Top 50 coexpressed genes to CHR8 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CHR8 (ath-u.5 coexpression data)

CoexMap"816391"


athCHR8 | Entrez gene ID : 816391      
Species ath gma vvi ppo mtr sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 9 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03420 [list] [network] Nucleotide excision repair (85 genes)
GO BP
GO:0010332 [list] [network] response to gamma radiation  (14 genes)  IMP  
GO:0006281 [list] [network] DNA repair  (203 genes)  IMP  
GO:0006974 [list] [network] DNA damage response  (246 genes)  IEP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (21 genes)  IEA  
Protein NP_001318246.1 [sequence] [blastp]
NP_001324142.1 [sequence] [blastp]
NP_001324143.1 [sequence] [blastp]
NP_001324144.1 [sequence] [blastp]
NP_001324145.1 [sequence] [blastp]
NP_001324146.1 [sequence] [blastp]
NP_179466.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1,  cysk 1  (predict for NP_001318246.1)
nucl 7,  cyto 1,  chlo 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001324142.1)
nucl 6,  cyto 2,  chlo 1,  cysk 1  (predict for NP_001324143.1)
nucl 6,  cyto 2,  chlo 1,  cysk 1  (predict for NP_001324144.1)
nucl 6,  cyto 2,  chlo 1,  cysk 1  (predict for NP_001324145.1)
nucl 6,  cyto 2,  chlo 1,  cysk 1  (predict for NP_001324146.1)
nucl 6,  cyto 2,  chlo 1,  cysk 1  (predict for NP_179466.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001318246.1)
other 8  (predict for NP_001324142.1)
other 8  (predict for NP_001324143.1)
other 8  (predict for NP_001324144.1)
other 8  (predict for NP_001324145.1)
other 8  (predict for NP_001324146.1)
other 8  (predict for NP_179466.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
CHR8

.
ath-r.7
for
CHR8

.
ath-m.9
for
CHR8

.
ath-e.2
for
CHR8

.
ath-m.4.bio
for
CHR8

.
ath-m.4.hor
for
CHR8

.
ath-m.4.lig
for
CHR8

.
ath-m.4.str
for
CHR8

.
ath-m.4.tis
for
CHR8

.
gma-u.5
for
100820025

.
vvi-u.5
for
100253251

.
ppo-u.5
for
7476928

.
mtr-u.5
for
25484243

.
sly-u.5
for
101252814

.
osa-u.5
for
CSB

.
zma-u.5
for
103649923

.


Ortholog ID: 10658
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sot cit bdi nta nta
Symbol CHR8 LOC100820025 LOC101252814 CSB LOC103649923 LOC103861842 LOC100253251 LOC7476928 LOC25484243 LOC123068696 LOC123077208 LOC123442739 LOC107927455 LOC107920099 LOC106389776 LOC106410369 CHLRE_06g270850v5 LOC102595123 LOC102607652 LOC100838784 LOC107801393 LOC107813734
Function* chromatin remodeling 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 DNA excision repair protein CSB-like DNA excision repair protein CSB protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 DNA excision repair protein CSB DNA excision repair protein CSB DNA excision repair protein CSB protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 uncharacterized protein protein CHROMATIN REMODELING 8 protein CHROMATIN REMODELING 8 DNA excision repair protein CSB protein CHROMATIN REMODELING 8 DNA excision repair protein CSB
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 3
ath03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03420 Nucleotide excision repair 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03082 ATP-dependent chromatin remodeling 2
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03420 Nucleotide excision repair 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03420 Nucleotide excision repair 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 6
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816391 100820025 101252814 4326441 103649923 103861842 100253251 7476928 25484243 123068696 123077208 123442739 107927455 107920099 106389776 106410369 5721844 102595123 102607652 100838784 107801393 107813734
The preparation time of this page was 0.1 [sec].