ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	542709	MADS box protein
zma-r.6	542709	MADS box protein
zma-m.5	542709	MADS box protein
zma-u.5	542256	bearded-ear 1
sbi-r.1	8057680	MADS-box transcription factor 17
sbi-r.1	8076029	MADS-box transcription factor 6
osa-u.5	4330328	MADS-box transcription factor 6-like
tae-r.2	123128010	MADS-box transcription factor 6
tae-r.2	123145106	MADS-box transcription factor 6
tae-r.2	542777	MADS-box transcription factor 6
bdi-r.1	AGL6	MADS-box transcription factor 6
gma-u.5	100820061	agamous-like MADS-box protein MADS3
gma-u.5	100810549	agamous-like MADS-box protein MADS3
sly-u.5	AGL6	AGAMOUS-like MADS-box protein AGL6
vvi-u.5	MADS3	MADS-box protein 3
vvi-u.5	100256085	agamous-like MADS-box protein MADS3
ghi-r.1	107962142	MADS-box transcription factor 6
ghi-r.1	107900914	agamous-like MADS-box protein MADS3
ghi-r.1	121221192	MADS-box transcription factor 6
sot-r.1	102602212	MADS-box transcription factor 6
cit-r.1	102613709	agamous-like MADS-box protein MADS3
cit-r.1	127901454	agamous-like MADS-box protein MADS3
nta-r.1	107821033	protein AGAMOUS-LIKE 6-like
nta-r.1	107818774	protein AGAMOUS-LIKE 6

Annotation

functional annotation

Function

MADS box protein

KEGG

GO BP

GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II

(124 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(3371 genes)

IEA

GO MF

GO:0000977 [list] [network] RNA polymerase II transcription regulatory region sequence-specific DNA binding	(246 genes)	IEA
GO:0046983 [list] [network] protein dimerization activity	(663 genes)	IEA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1355 genes)	IEA

Protein

NP_001105692.2 [sequence] [blastp]
XP_008677797.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for NP_001105692.2)
nucl 10	(predict for XP_008677797.1)

Subcellular
localization
TargetP

other 8, mito 4	(predict for NP_001105692.2)
other 8, mito 4	(predict for XP_008677797.1)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 542709	zma-r.6 for 542709	zma-m.5 for 542709	zma-u.5 for 542256	sbi-r.1 for 8057680	sbi-r.1 for 8076029	osa-u.5 for 4330328	tae-r.2 for 123128010	tae-r.2 for 123145106	tae-r.2 for 542777	bdi-r.1 for AGL6	gma-u.5 for 100820061	gma-u.5 for 100810549	sly-u.5 for AGL6	vvi-u.5 for MADS3	vvi-u.5 for 100256085	ghi-r.1 for 107962142	ghi-r.1 for 107900914	ghi-r.1 for 121221192	sot-r.1 for 102602212	cit-r.1 for 102613709	cit-r.1 for 127901454	nta-r.1 for 107821033	nta-r.1 for 107818774