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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100821237   RNA-binding KH domain-containing protein RCF3 
 bdi-r.1   100823299   RNA-binding KH domain-containing protein RCF3 
 tae-r.2   123097381   KH domain-containing protein HEN4 
 tae-r.2   123092178   RNA-binding KH domain-containing protein RCF3 
 tae-r.2   123086013   RNA-binding KH domain-containing protein RCF3 
 hvu-r.1   123448685   KH domain-containing protein At4g18375-like 
 osa-u.5   4332959   KH domain-containing protein At4g18375 
 zma-u.5   118473387   RNA-binding KH domain-containing protein RCF3 
 zma-u.5   100502234   RNA-binding KH domain-containing protein 
 sbi-r.1   110436638   KH domain-containing protein HEN4 
 ath-u.5   AT5G15270   RNA-binding KH domain-containing protein 
 ath-u.5   AT1G14170   RNA-binding KH domain-containing protein 
 gma-u.5   100804157   KH domain-containing protein HEN4 
 gma-u.5   100793526   KH domain-containing protein HEN4 
 gma-u.5   100787863   KH domain-containing protein At4g18375 
 sly-u.5   101245943   KH domain-containing protein At4g18375 
 sly-u.5   101244550   RNA-binding KH domain-containing protein 
 bra-r.6   103842994   RNA-binding KH domain-containing protein RCF3 
 bra-r.6   103846424   KH domain-containing protein HEN4 
 bra-r.6   103856127   RNA-binding KH domain-containing protein RCF3 
 vvi-u.5   100261236   KH domain-containing protein At4g18375 
 vvi-u.5   100854959   uncharacterized LOC100854959 
 vvi-u.5   100265365   KH domain-containing protein HEN4 
 ppo-u.5   7463046   KH domain-containing protein At4g18375 
 ppo-u.5   7498181   KH domain-containing protein At4g18375 
 ppo-u.5   7495986   RNA-binding KH domain-containing protein RCF3 
 mtr-u.5   11414473   KH domain-containing protein HEN4 
 mtr-u.5   11422996   RNA-binding KH domain-containing protein RCF3 
 ghi-r.1   107937411   KH domain-containing protein HEN4 
 ghi-r.1   107920179   RNA-binding KH domain-containing protein RCF3 
 ghi-r.1   107893678   RNA-binding KH domain-containing protein RCF3 
 bna-r.1   106411694   KH domain-containing protein HEN4 
 bna-r.1   106410756   KH domain-containing protein At4g18375-like 
 bna-r.1   106346492   KH domain-containing protein HEN4-like 
 sot-r.1   102579670   KH domain-containing protein At4g18375-like 
 sot-r.1   102600656   KH domain-containing protein At4g18375-like 
 sot-r.1   102606449   KH domain-containing protein At4g18375 
 cit-r.1   102609499   KH domain-containing protein At4g18375 
 cit-r.1   102619226   KH domain-containing protein HEN4 
 nta-r.1   107808624   RNA-binding KH domain-containing protein RCF3 
 nta-r.1   107811648   KH domain-containing protein At4g18375 
 nta-r.1   107822217   KH domain-containing protein At4g18375 

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Top 50 coexpressed genes to 100821237 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100821237 (bdi-r.1 coexpression data)

CoexMap"100821237"


bdiLOC100821237 | Entrez gene ID : 100821237      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 1 1 2 1 2 3 2 3 3 3 2 3 3 3 2 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010468 [list] [network] regulation of gene expression  (1881 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4615 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (271 genes)  IEA  
Protein XP_003557867.1 [sequence] [blastp]
XP_010228570.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  cyto 1  (predict for XP_003557867.1)
nucl 6,  chlo 2,  cyto 1  (predict for XP_010228570.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for XP_003557867.1)
other 8,  mito 4  (predict for XP_010228570.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100821237
bdi-r.1
for
100823299
tae-r.2
for
123097381
tae-r.2
for
123092178
tae-r.2
for
123086013
hvu-r.1
for
123448685
osa-u.5
for
4332959
zma-u.5
for
118473387
zma-u.5
for
100502234
sbi-r.1
for
110436638
ath-u.5
for
AT5G15270
ath-u.5
for
AT1G14170
gma-u.5
for
100804157
gma-u.5
for
100793526
gma-u.5
for
100787863
sly-u.5
for
101245943
sly-u.5
for
101244550
bra-r.6
for
103842994
bra-r.6
for
103846424
bra-r.6
for
103856127
vvi-u.5
for
100261236
vvi-u.5
for
100854959
vvi-u.5
for
100265365
ppo-u.5
for
7463046
ppo-u.5
for
7498181
ppo-u.5
for
7495986
mtr-u.5
for
11414473
mtr-u.5
for
11422996
ghi-r.1
for
107937411
ghi-r.1
for
107920179
ghi-r.1
for
107893678
bna-r.1
for
106411694
bna-r.1
for
106410756
bna-r.1
for
106346492
sot-r.1
for
102579670
sot-r.1
for
102600656
sot-r.1
for
102606449
cit-r.1
for
102609499
cit-r.1
for
102619226
nta-r.1
for
107808624
nta-r.1
for
107811648
nta-r.1
for
107822217


Ortholog ID: 2784
Species bdi bdi tae tae tae hvu osa zma zma sbi ath ath gma gma gma sly sly bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit nta nta nta
Symbol LOC100821237 LOC100823299 LOC123097381 LOC123092178 LOC123086013 LOC123448685 LOC4332959 LOC118473387 LOC100502234 LOC110436638 AT5G15270 AT1G14170 LOC100804157 LOC100787863 LOC100784791 LOC101245943 LOC101244550 LOC103842994 LOC103846424 LOC103856127 LOC100261236 LOC100854959 LOC100265365 LOC7463046 LOC7495986 LOC7492929 LOC11414473 LOC11422996 LOC107920179 LOC107890460 LOC107890459 LOC106410756 LOC106370564 LOC106430986 LOC102579670 LOC102600656 LOC102606449 LOC102609499 LOC102619226 LOC107808624 LOC107811648 LOC107831051
Function* RNA-binding KH domain-containing protein RCF3 RNA-binding KH domain-containing protein RCF3 KH domain-containing protein HEN4 RNA-binding KH domain-containing protein RCF3 RNA-binding KH domain-containing protein RCF3 KH domain-containing protein At4g18375-like KH domain-containing protein At4g18375 RNA-binding KH domain-containing protein RCF3 RNA-binding KH domain-containing protein KH domain-containing protein HEN4 RNA-binding KH domain-containing protein RNA-binding KH domain-containing protein KH domain-containing protein HEN4 KH domain-containing protein At4g18375 RNA-binding KH domain-containing protein RCF3 KH domain-containing protein At4g18375 RNA-binding KH domain-containing protein RNA-binding KH domain-containing protein RCF3 KH domain-containing protein HEN4 RNA-binding KH domain-containing protein RCF3 KH domain-containing protein At4g18375 uncharacterized LOC100854959 KH domain-containing protein HEN4 KH domain-containing protein At4g18375 RNA-binding KH domain-containing protein RCF3 KH domain-containing protein At4g18375 KH domain-containing protein HEN4 RNA-binding KH domain-containing protein RCF3 RNA-binding KH domain-containing protein RCF3 KH domain-containing protein HEN4 RNA-binding KH domain-containing protein RCF3 KH domain-containing protein At4g18375-like KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein At4g18375-like KH domain-containing protein At4g18375-like KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein HEN4 RNA-binding KH domain-containing protein RCF3 KH domain-containing protein At4g18375 RNA-binding KH domain-containing protein RCF3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00020 Citrate cycle (TCA cycle) 2
bdi00785 Lipoic acid metabolism 2
bdi01200 Carbon metabolism 2
bdi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00020 Citrate cycle (TCA cycle) 2
bdi00785 Lipoic acid metabolism 2
bdi01200 Carbon metabolism 2
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04814 Motor proteins 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00514 Other types of O-glycan biosynthesis 3
ath00480 Glutathione metabolism 2
ath00330 Arginine and proline metabolism 2
ath04141 Protein processing in endoplasmic reticulum 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma03015 mRNA surveillance pathway 6
gma03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 4
sly04142 Lysosome 3
sly05100 Bacterial invasion of epithelial cells 3
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
bra04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
vvi00970 Aminoacyl-tRNA biosynthesis 2
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03015 mRNA surveillance pathway 3
mtr04075 Plant hormone signal transduction 2
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03250 Viral life cycle - HIV-1 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 4
ghi04120 Ubiquitin mediated proteolysis 4
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03018 RNA degradation 3
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03018 RNA degradation 3
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100821237 100823299 123097381 123092178 123086013 123448685 4332959 118473387 100502234 110436638 831379 837976 100804157 100787863 100784791 101245943 101244550 103842994 103846424 103856127 100261236 100854959 100265365 7463046 7495986 7492929 11414473 11422996 107920179 107890460 107890459 106410756 106370564 106430986 102579670 102600656 102606449 102609499 102619226 107808624 107811648 107831051
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