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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100828331   protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 tae-r.2   123110514   protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 tae-r.2   123119540   protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 tae-r.2   123102356   protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 hvu-r.1   123398246   protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 osa-u.5   4350378   protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic-like 
 zma-u.5   100276194   uncharacterized LOC100276194 
 sbi-r.1   8057060   protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 ath-u.5   AT5G48470   uncharacterized protein 
 gma-u.5   100799171   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 gma-u.5   100795042   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 sly-u.5   101257209   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 bra-r.6   103837255   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 vvi-u.5   100265443   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 ppo-u.5   7471187   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 mtr-u.5   11438261   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 ghi-r.1   107954656   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 ghi-r.1   107952752   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 bna-r.1   BNAC09G02460D   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 bna-r.1   106365809   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic-like 
 sot-r.1   102594523   uncharacterized LOC102594523 
 cit-r.1   102624744   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 nta-r.1   107811735   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic-like 
 nta-r.1   107813996   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 cre-r.1   CHLRE_09g393800v5   uncharacterized protein 

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Top 50 coexpressed genes to 100828331 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100828331 (bdi-r.1 coexpression data)

CoexMap"100828331"


bdiLOC100828331 | Entrez gene ID : 100828331      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1579 genes)  IEA  
GO CC
GO:0042644 [list] [network] chloroplast nucleoid  (6 genes)  IEA  
GO MF
Protein XP_003577592.1 [sequence] [blastp]
XP_010237735.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  chlo_mito 5,  mito 4  (predict for XP_003577592.1)
chlo 6,  chlo_mito 6,  mito 4  (predict for XP_010237735.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003577592.1)
chlo 8  (predict for XP_010237735.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100828331
tae-r.2
for
123110514
tae-r.2
for
123119540
tae-r.2
for
123102356
hvu-r.1
for
123398246
osa-u.5
for
4350378
zma-u.5
for
100276194
sbi-r.1
for
8057060
ath-u.5
for
AT5G48470
gma-u.5
for
100799171
gma-u.5
for
100795042
sly-u.5
for
101257209
bra-r.6
for
103837255
vvi-u.5
for
100265443
ppo-u.5
for
7471187
mtr-u.5
for
11438261
ghi-r.1
for
107954656
ghi-r.1
for
107952752
bna-r.1
for
BNAC09G02460D
bna-r.1
for
106365809
sot-r.1
for
102594523
cit-r.1
for
102624744
nta-r.1
for
107811735
nta-r.1
for
107813996
cre-r.1
for
CHLRE_09g393800v5


Ortholog ID: 8645
Species bdi tae tae tae hvu osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100828331 LOC123110514 LOC123119540 LOC123102356 LOC123398246 LOC4350378 LOC100276194 LOC8057060 AT5G48470 LOC100799171 LOC100795042 LOC101257209 LOC103837255 LOC100265443 LOC7471187 LOC11438261 LOC107954656 LOC107952752 BNAC09G02460D LOC106365809 LOC102594523 LOC102624744 LOC107811735 LOC107813996 CHLRE_09g393800v5
Function* protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic-like uncharacterized LOC100276194 protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic uncharacterized protein protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic-like uncharacterized LOC102594523 protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic-like protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100828331 123110514 123119540 123102356 123398246 4350378 100276194 8057060 834902 100799171 100795042 101257209 103837255 100265443 7471187 11438261 107954656 107952752 106428092 106365809 102594523 102624744 107811735 107813996 5720123
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