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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100837986   eukaryotic translation initiation factor 3 subunit A 
 tae-r.2   123059857   eukaryotic translation initiation factor 3 subunit A 
 tae-r.2   123068249   eukaryotic translation initiation factor 3 subunit A 
 tae-r.2   123087857   eukaryotic translation initiation factor 3 subunit A 
 hvu-r.1   123442514   eukaryotic translation initiation factor 3 subunit A 
 osa-u.5   4326038   eukaryotic translation initiation factor 3 subunit A 
 zma-u.5   103636806   eukaryotic translation initiation factor 3 subunit A-like 
 zma-u.5   542747   eukaryotic initiation factor 3 
 sbi-r.1   8070431   eukaryotic translation initiation factor 3 subunit A 
 sbi-r.1   8084361   eukaryotic translation initiation factor 3 subunit A 
 ath-u.5   EIF3A   eukaryotic translation initiation factor 3A 
 gma-u.5   100782598   eukaryotic translation initiation factor 3 subunit A 
 gma-u.5   100803796   eukaryotic translation initiation factor 3 subunit A 
 sly-u.5   101263839   eukaryotic translation initiation factor 3 subunit A-like 
 sly-u.5   101260094   eukaryotic translation initiation factor 3 subunit A-like 
 bra-r.6   103858603   eukaryotic translation initiation factor 3 subunit A 
 bra-r.6   103833861   eukaryotic translation initiation factor 3 subunit A 
 bra-r.6   103853524   eukaryotic translation initiation factor 3 subunit A 
 vvi-u.5   100244162   eukaryotic translation initiation factor 3 subunit A 
 ppo-u.5   18098628   eukaryotic translation initiation factor 3 subunit A 
 ppo-u.5   7481705   eukaryotic translation initiation factor 3 subunit A 
 mtr-u.5   11428993   eukaryotic translation initiation factor 3 subunit A 
 mtr-u.5   11428220   eukaryotic translation initiation factor 3 subunit A 
 mtr-u.5   11435937   eukaryotic translation initiation factor 3 subunit A 
 ghi-r.1   107927259   eukaryotic translation initiation factor 3 subunit A 
 ghi-r.1   121209347   eukaryotic translation initiation factor 3 subunit A 
 ghi-r.1   107962766   uncharacterized LOC107962766 
 bna-r.1   111212580   eukaryotic translation initiation factor 3 subunit A 
 bna-r.1   106384088   eukaryotic translation initiation factor 3 subunit A 
 bna-r.1   106401144   eukaryotic translation initiation factor 3 subunit A 
 sot-r.1   102585101   eukaryotic translation initiation factor 3 subunit A-like 
 sot-r.1   102596360   eukaryotic translation initiation factor 3 subunit A-like 
 cit-r.1   102609271   eukaryotic translation initiation factor 3 subunit A 
 cit-r.1   102617782   eukaryotic translation initiation factor 3 subunit A-like 
 nta-r.1   107760201   eukaryotic translation initiation factor 3 subunit A-like 
 nta-r.1   107782623   eukaryotic translation initiation factor 3 subunit A 
 nta-r.1   107800825   eukaryotic translation initiation factor 3 subunit A-like 
 cre-r.1   CHLRE_13g564250v5   uncharacterized protein 

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Top 50 coexpressed genes to 100837986 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100837986 (bdi-r.1 coexpression data)

CoexMap"100837986"


bdiLOC100837986 | Entrez gene ID : 100837986      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 2 2 1 2 2 3 1 2 3 3 3 2 2 3 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002188 [list] [network] translation reinitiation  (2 genes)  IEA  
GO:0001732 [list] [network] formation of cytoplasmic translation initiation complex  (3 genes)  IEA  
GO CC
GO:0071540 [list] [network] eukaryotic translation initiation factor 3 complex, eIF3e  (1 genes)  IEA  
GO:0043614 [list] [network] multi-eIF complex  (3 genes)  IEA  
GO:0071541 [list] [network] eukaryotic translation initiation factor 3 complex, eIF3m  (3 genes)  IEA  
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (56 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (271 genes)  IEA  
Protein XP_003567693.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3  (predict for XP_003567693.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003567693.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100837986
tae-r.2
for
123059857
tae-r.2
for
123068249
tae-r.2
for
123087857
hvu-r.1
for
123442514
osa-u.5
for
4326038
zma-u.5
for
103636806
zma-u.5
for
542747
sbi-r.1
for
8070431
sbi-r.1
for
8084361
ath-u.5
for
EIF3A
gma-u.5
for
100782598
gma-u.5
for
100803796
sly-u.5
for
101263839
sly-u.5
for
101260094
bra-r.6
for
103858603
bra-r.6
for
103833861
bra-r.6
for
103853524
vvi-u.5
for
100244162
ppo-u.5
for
18098628
ppo-u.5
for
7481705
mtr-u.5
for
11428993
mtr-u.5
for
11428220
mtr-u.5
for
11435937
ghi-r.1
for
107927259
ghi-r.1
for
121209347
ghi-r.1
for
107962766
bna-r.1
for
111212580
bna-r.1
for
106384088
bna-r.1
for
106401144
sot-r.1
for
102585101
sot-r.1
for
102596360
cit-r.1
for
102609271
cit-r.1
for
102617782
nta-r.1
for
107760201
nta-r.1
for
107782623
nta-r.1
for
107800825
cre-r.1
for
CHLRE_13g564250v5


Ortholog ID: 3599
Species bdi tae tae tae hvu osa zma zma sbi sbi ath gma gma sly sly bra bra bra vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot cit cit nta nta nta cre
Symbol LOC100837986 LOC123059857 LOC123068249 LOC123154187 LOC123442514 LOC4326038 LOC103636806 LOC542747 LOC8070431 LOC8084361 EIF3A LOC100782598 LOC100803796 LOC101263839 LOC101260094 LOC103858603 LOC103833861 LOC103853524 LOC100244162 LOC18098628 LOC7481705 LOC11428993 LOC11428220 LOC11435937 LOC121209347 LOC107962766 LOC107894061 LOC111212580 LOC106401144 LOC106422370 LOC102585101 LOC102596360 LOC102609271 LOC102617782 LOC107760201 LOC107782623 LOC107800825 CHLRE_13g564250v5
Function* eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A-like eukaryotic initiation factor 3 eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A-like eukaryotic translation initiation factor 3 subunit A-like eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A uncharacterized LOC107962766 eukaryotic translation initiation factor 3 subunit A-like eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A-like eukaryotic translation initiation factor 3 subunit A-like eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A-like eukaryotic translation initiation factor 3 subunit A-like eukaryotic translation initiation factor 3 subunit A eukaryotic translation initiation factor 3 subunit A-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
sbi03015 mRNA surveillance pathway 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly00010 Glycolysis / Gluconeogenesis 3
sly01200 Carbon metabolism 3
sly00020 Citrate cycle (TCA cycle) 2
sly00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
mtr03040 Spliceosome 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 5
ghi00500 Starch and sucrose metabolism 5
ghi00710 Carbon fixation by Calvin cycle 4
ghi01200 Carbon metabolism 4
ghi00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100837986 123059857 123068249 123154187 123442514 4326038 103636806 542747 8070431 8084361 826746 100782598 100803796 101263839 101260094 103858603 103833861 103853524 100244162 18098628 7481705 11428993 11428220 11435937 121209347 107962766 107894061 111212580 106401144 106422370 102585101 102596360 102609271 102617782 107760201 107782623 107800825 5719002
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