ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	11435937	eukaryotic translation initiation factor 3 subunit A
mtr-r.5	11435937	eukaryotic translation initiation factor 3 subunit A
mtr-m.5	11435937	eukaryotic translation initiation factor 3 subunit A
mtr-u.5	11428993	eukaryotic translation initiation factor 3 subunit A
mtr-u.5	11433412	eukaryotic translation initiation factor 3 subunit A
mtr-u.5	11428220	eukaryotic translation initiation factor 3 subunit A
gma-u.5	100782598	eukaryotic translation initiation factor 3 subunit A
gma-u.5	100803796	eukaryotic translation initiation factor 3 subunit A
ppo-u.5	18098628	eukaryotic translation initiation factor 3 subunit A
ppo-u.5	7481705	eukaryotic translation initiation factor 3 subunit A
ath-u.5	EIF3A	eukaryotic translation initiation factor 3A
bra-r.6	103858603	eukaryotic translation initiation factor 3 subunit A
bra-r.6	103853524	eukaryotic translation initiation factor 3 subunit A
bra-r.6	103833861	eukaryotic translation initiation factor 3 subunit A
vvi-u.5	100244162	eukaryotic translation initiation factor 3 subunit A
ghi-r.1	107927259	eukaryotic translation initiation factor 3 subunit A
ghi-r.1	121209347	eukaryotic translation initiation factor 3 subunit A
ghi-r.1	107962766	uncharacterized LOC107962766
bna-r.1	106384088	eukaryotic translation initiation factor 3 subunit A
bna-r.1	106401144	eukaryotic translation initiation factor 3 subunit A
bna-r.1	111212580	eukaryotic translation initiation factor 3 subunit A
cit-r.1	102609271	eukaryotic translation initiation factor 3 subunit A
cit-r.1	102617782	eukaryotic translation initiation factor 3 subunit A-like
sly-u.5	101263839	eukaryotic translation initiation factor 3 subunit A-like
sly-u.5	101260094	eukaryotic translation initiation factor 3 subunit A-like
sot-r.1	102585101	eukaryotic translation initiation factor 3 subunit A-like
sot-r.1	102596360	eukaryotic translation initiation factor 3 subunit A-like
nta-r.1	107760201	eukaryotic translation initiation factor 3 subunit A-like
nta-r.1	107800825	eukaryotic translation initiation factor 3 subunit A-like
nta-r.1	107782623	eukaryotic translation initiation factor 3 subunit A
osa-u.5	4326038	eukaryotic translation initiation factor 3 subunit A
zma-u.5	542747	eukaryotic initiation factor 3
zma-u.5	103636806	eukaryotic translation initiation factor 3 subunit A-like
tae-r.2	123068249	eukaryotic translation initiation factor 3 subunit A
tae-r.2	123059857	eukaryotic translation initiation factor 3 subunit A
tae-r.2	123087857	eukaryotic translation initiation factor 3 subunit A
hvu-r.1	123442514	eukaryotic translation initiation factor 3 subunit A
sbi-r.1	8070431	eukaryotic translation initiation factor 3 subunit A
sbi-r.1	8084361	eukaryotic translation initiation factor 3 subunit A
bdi-r.1	100837986	eukaryotic translation initiation factor 3 subunit A
cre-r.1	CHLRE_13g564250v5	uncharacterized protein

Top 50 coexpressed genes to 11435937 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 11435937 (mtr-u.5 coexpression data)

CoexMap"11435937"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0001732 [list] [network] formation of cytoplasmic translation initiation complex	(5 genes)	IEA
GO:0002188 [list] [network] translation reinitiation	(5 genes)	IEA

GO CC

GO:0043614 [list] [network] multi-eIF complex	(4 genes)	IEA
GO:0071540 [list] [network] eukaryotic translation initiation factor 3 complex, eIF3e	(4 genes)	IEA
GO:0071541 [list] [network] eukaryotic translation initiation factor 3 complex, eIF3m	(7 genes)	IEA

GO MF

GO:0003743 [list] [network] translation initiation factor activity	(66 genes)	IEA
GO:0003729 [list] [network] mRNA binding	(294 genes)	IEA

Protein

XP_024625336.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, nucl 2, mito 2, cyto 1, E.R. 1, pero 1, golg 1, cyto_pero 1, cyto_E.R. 1

(predict for XP_024625336.1)

Subcellular
localization
TargetP

chlo 5, other 4

(predict for XP_024625336.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11435937	mtr-r.5 for 11435937	mtr-m.5 for 11435937	mtr-u.5 for 11428993	mtr-u.5 for 11433412	mtr-u.5 for 11428220	gma-u.5 for 100782598	gma-u.5 for 100803796	ppo-u.5 for 18098628	ppo-u.5 for 7481705	ath-u.5 for EIF3A	bra-r.6 for 103858603	bra-r.6 for 103853524	bra-r.6 for 103833861	vvi-u.5 for 100244162	ghi-r.1 for 107927259	ghi-r.1 for 121209347	ghi-r.1 for 107962766	bna-r.1 for 106384088	bna-r.1 for 106401144	bna-r.1 for 111212580	cit-r.1 for 102609271	cit-r.1 for 102617782	sly-u.5 for 101263839	sly-u.5 for 101260094	sot-r.1 for 102585101	sot-r.1 for 102596360	nta-r.1 for 107760201	nta-r.1 for 107800825	nta-r.1 for 107782623	osa-u.5 for 4326038	zma-u.5 for 542747	zma-u.5 for 103636806	tae-r.2 for 123068249	tae-r.2 for 123059857	tae-r.2 for 123087857	hvu-r.1 for 123442514	sbi-r.1 for 8070431	sbi-r.1 for 8084361	bdi-r.1 for 100837986	cre-r.1 for CHLRE_13g564250v5

Ortholog

Ortholog ID: 3599

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

EIF3A

Function^*