ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100838586	PH, RCC1 and FYVE domains-containing protein 1
bdi-r.1	100825305	PH, RCC1 and FYVE domains-containing protein 1
bdi-r.1	100834588	PH, RCC1 and FYVE domains-containing protein 1
bdi-r.1	100836916	PH, RCC1 and FYVE domains-containing protein 1
tae-r.2	123080719	PH, RCC1 and FYVE domains-containing protein 1
hvu-r.1	123445529	PH, RCC1 and FYVE domains-containing protein 1-like
hvu-r.1	123427836	PH, RCC1 and FYVE domains-containing protein 1
hvu-r.1	123407055	PH, RCC1 and FYVE domains-containing protein 1-like
osa-u.5	4336778	PH, RCC1 and FYVE domains-containing protein 1
osa-u.5	4325746	PH, RCC1 and FYVE domains-containing protein 1
zma-u.5	100280426	uncharacterized LOC100280426
zma-u.5	103636281	Putative regulator of chromosome condensation (RCC1) family protein
zma-u.5	103646027	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
sbi-r.1	8057696	uncharacterized LOC8057696
sbi-r.1	8077365	uncharacterized LOC8077365
ath-u.5	AT5G12350	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
ath-u.5	AT5G19420	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
ath-u.5	AT1G65920	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
gma-u.5	100794953	PH, RCC1 and FYVE domains-containing protein 1
gma-u.5	100791947	PH, RCC1 and FYVE domains-containing protein 1
gma-u.5	100802464	PH, RCC1 and FYVE domains-containing protein 1
sly-u.5	101262813	PH, RCC1 and FYVE domains-containing protein 1-like
sly-u.5	101267670	PH, RCC1 and FYVE domains-containing protein 1
sly-u.5	101257851	PH, RCC1 and FYVE domains-containing protein 1
bra-r.6	103845756	PH, RCC1 and FYVE domains-containing protein 1
bra-r.6	103846644	PH, RCC1 and FYVE domains-containing protein 1
vvi-u.5	100253065	PH, RCC1 and FYVE domains-containing protein 1
vvi-u.5	100250008	PH, RCC1 and FYVE domains-containing protein 1
vvi-u.5	100243300	PH, RCC1 and FYVE domains-containing protein 1
ppo-u.5	7496775	PH, RCC1 and FYVE domains-containing protein 1
mtr-u.5	11425815	PH, RCC1 and FYVE domains-containing protein 1
mtr-u.5	112417506	PH, RCC1 and FYVE domains-containing protein 1
ghi-r.1	107920477	PH, RCC1 and FYVE domains-containing protein 1
ghi-r.1	107915135	PH, RCC1 and FYVE domains-containing protein 1
ghi-r.1	107912868	PH, RCC1 and FYVE domains-containing protein 1
bna-r.1	106434266	PH, RCC1 and FYVE domains-containing protein 1-like
bna-r.1	106372363	PH, RCC1 and FYVE domains-containing protein 1
sot-r.1	102600493	uncharacterized LOC102600493
sot-r.1	102590844	uncharacterized LOC102590844
sot-r.1	102588539	uncharacterized LOC102588539
cit-r.1	102630015	PH, RCC1 and FYVE domains-containing protein 1-like
cit-r.1	102629590	PH, RCC1 and FYVE domains-containing protein 1
cit-r.1	102612328	PH, RCC1 and FYVE domains-containing protein 1
nta-r.1	107798229	PH, RCC1 and FYVE domains-containing protein 1
nta-r.1	107796116	PH, RCC1 and FYVE domains-containing protein 1-like
nta-r.1	107772149	PH, RCC1 and FYVE domains-containing protein 1-like
cre-r.1	CHLRE_16g691050v5	uncharacterized protein

Top 50 coexpressed genes to 100838586 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100838586 (bdi-r.1 coexpression data)

CoexMap"100838586"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0046872 [list] [network] metal ion binding

(1763 genes)

IEA

Protein

XP_003568548.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto 1, chlo 1, mito 1, chlo_mito 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_003568548.1)

Subcellular
localization
TargetP

other 9

(predict for XP_003568548.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100838586	bdi-r.1 for 100825305	bdi-r.1 for 100834588	bdi-r.1 for 100836916	tae-r.2 for 123080719	hvu-r.1 for 123445529	hvu-r.1 for 123427836	hvu-r.1 for 123407055	osa-u.5 for 4336778	osa-u.5 for 4325746	zma-u.5 for 100280426	zma-u.5 for 103636281	zma-u.5 for 103646027	sbi-r.1 for 8057696	sbi-r.1 for 8077365	ath-u.5 for AT5G12350	ath-u.5 for AT5G19420	ath-u.5 for AT1G65920	gma-u.5 for 100794953	gma-u.5 for 100791947	gma-u.5 for 100802464	sly-u.5 for 101262813	sly-u.5 for 101267670	sly-u.5 for 101257851	bra-r.6 for 103845756	bra-r.6 for 103846644	vvi-u.5 for 100253065	vvi-u.5 for 100250008	vvi-u.5 for 100243300	ppo-u.5 for 7496775	mtr-u.5 for 11425815	mtr-u.5 for 112417506	ghi-r.1 for 107920477	ghi-r.1 for 107915135	ghi-r.1 for 107912868	bna-r.1 for 106434266	bna-r.1 for 106372363	sot-r.1 for 102600493	sot-r.1 for 102590844	sot-r.1 for 102588539	cit-r.1 for 102630015	cit-r.1 for 102629590	cit-r.1 for 102612328	nta-r.1 for 107798229	nta-r.1 for 107796116	nta-r.1 for 107772149	cre-r.1 for CHLRE_16g691050v5

Ortholog

Ortholog ID: 695

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

G93

Function^*

PH, RCC1 and FYVE domains-containing protein 1

PH, RCC1 and FYVE domains-containing protein 1-like

PH, RCC1 and FYVE domains-containing protein 1

Putative regulator of chromosome condensation (RCC1) family protein

Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain

Putative regulator of chromosome condensation (RCC1) family protein

uncharacterized LOC8057696

uncharacterized LOC8077365

Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein

PH, RCC1 and FYVE domains-containing protein 1

PH/RCC1/FYVE zinc finger domain-containing protein G93

PH, RCC1 and FYVE domains-containing protein 1

PH, RCC1 and FYVE domains-containing protein 1-like

PH, RCC1 and FYVE domains-containing protein 1

uncharacterized LOC102600493

uncharacterized LOC102588539

uncharacterized LOC102578724

PH, RCC1 and FYVE domains-containing protein 1-like

PH, RCC1 and FYVE domains-containing protein 1

PH, RCC1 and FYVE domains-containing protein 1-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00630	Glyoxylate and dicarboxylate metabolism	3
osa01200	Carbon metabolism	3
osa00260	Glycine, serine and threonine metabolism	2
osa00710	Carbon fixation by Calvin cycle	2
osa01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03030	DNA replication	3
sbi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	3
gma04075	Plant hormone signal transduction	2
gma00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	4
gma04075	Plant hormone signal transduction	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	4
cit04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03440	Homologous recombination	2
nta03460	Fanconi anemia pathway	2

Expression

Expression pattern

Entrez Gene ID^*

100834588

100836916

100842512

123080719

123054117

123445529

123407055

123401550

4336778

4325746

103636281

103646027

103653921

8057696

8077365

831110

832062

100794953

100806439

100797223

101257851

101256573

101265608

103845756

103850825

100253065

100250008

100243300

7496775

7476847

11425815

112419908

107920477

107938375

121207585

106372363

106403596

106380801

102600493

102588539

102578724

102630015

102612328

102623335

107774471

107806494

107799299

66056808

The preparation time of this page was 0.2 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	1	3	2	3	2	3	3	3	2	3	1	2	3	2	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100838586 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100838586 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**