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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100839326   E3 ubiquitin-protein ligase RBBP6 
 tae-r.2   123097024   E3 ubiquitin ligase PQT3-like 
 sly-u.5   101268302   E3 ubiquitin ligase PQT3-like 
 vvi-u.5   100252571   E3 ubiquitin ligase PARAQUAT TOLERANCE 3 
 ghi-r.1   107901011   E3 ubiquitin ligase PQT3-like 
 ghi-r.1   107942927   E3 ubiquitin ligase PQT3-like 
 sot-r.1   102580976   E3 ubiquitin-protein ligase RBBP6-like 
 cit-r.1   102613848   E3 ubiquitin ligase PQT3-like 
 nta-r.1   107791886   uncharacterized LOC107791886 

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Top 50 coexpressed genes to 100839326 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100839326 (bdi-r.1 coexpression data)

CoexMap"100839326"


bdiLOC100839326 | Entrez gene ID : 100839326      
Species bdi tae sly vvi ghi sot cit nta cre bra ppo ath mtr hvu bna osa gma zma sbi
Paralog 1 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006397 [list] [network] mRNA processing  (225 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (273 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (411 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (193 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (707 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3313 genes)  IEA  
Protein XP_010237526.1 [sequence] [blastp]
XP_014758166.1 [sequence] [blastp]
XP_014758167.1 [sequence] [blastp]
XP_014758169.1 [sequence] [blastp]
XP_024310236.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1  (predict for XP_010237526.1)
nucl 8,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1  (predict for XP_014758166.1)
nucl 8,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1  (predict for XP_014758167.1)
nucl 6,  mito 4  (predict for XP_014758169.1)
nucl 8,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1  (predict for XP_024310236.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_010237526.1)
mito 8  (predict for XP_014758166.1)
mito 8  (predict for XP_014758167.1)
mito 8  (predict for XP_014758169.1)
mito 8  (predict for XP_024310236.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100839326
tae-r.2
for
123097024
sly-u.5
for
101268302
vvi-u.5
for
100252571
ghi-r.1
for
107901011
ghi-r.1
for
107942927
sot-r.1
for
102580976
cit-r.1
for
102613848
nta-r.1
for
107791886


Ortholog ID: 16185
Species bdi tae sly vvi ghi ghi sot cit nta
Symbol LOC100839326 LOC123097024 LOC101268302 LOC100252571 LOC107901011 LOC107942927 LOC102580976 LOC102613848 LOC107791886
Function* E3 ubiquitin-protein ligase RBBP6 E3 ubiquitin ligase PQT3-like E3 ubiquitin ligase PQT3-like E3 ubiquitin ligase PARAQUAT TOLERANCE 3 E3 ubiquitin ligase PQT3-like E3 ubiquitin ligase PQT3-like E3 ubiquitin-protein ligase RBBP6-like E3 ubiquitin ligase PQT3-like uncharacterized LOC107791886
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04082 Neuroactive ligand signaling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100839326 123097024 101268302 100252571 107901011 107942927 102580976 102613848 107791886
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