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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107901011   E3 ubiquitin ligase PQT3-like 
 ghi-r.1   107942927   E3 ubiquitin ligase PQT3-like 
 cit-r.1   102613848   E3 ubiquitin ligase PQT3-like 
 vvi-u.5   100252571   E3 ubiquitin ligase PARAQUAT TOLERANCE 3 
 sly-u.5   101268302   E3 ubiquitin ligase PQT3-like 
 sot-r.1   102580976   E3 ubiquitin-protein ligase RBBP6-like 
 nta-r.1   107791886   uncharacterized LOC107791886 
 tae-r.2   123097024   E3 ubiquitin ligase PQT3-like 
 bdi-r.1   100839326   E3 ubiquitin-protein ligase RBBP6 

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Top 50 coexpressed genes to 107901011 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107901011 (ghi-r.1 coexpression data)

CoexMap"107901011"


ghiLOC107901011 | Entrez gene ID : 107901011    
Species ghi cit vvi sly sot nta tae bdi osa bra ppo ath zma mtr hvu sbi cre gma bna
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (782 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (9083 genes)  IEA  
Protein XP_040951826.1 [sequence] [blastp]
XP_040951827.1 [sequence] [blastp]
XP_040951828.1 [sequence] [blastp]
XP_040951829.1 [sequence] [blastp]
XP_040951830.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_040951826.1)
nucl 10  (predict for XP_040951827.1)
nucl 10  (predict for XP_040951828.1)
nucl 10  (predict for XP_040951829.1)
nucl 10  (predict for XP_040951830.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040951826.1)
other 8  (predict for XP_040951827.1)
other 8  (predict for XP_040951828.1)
other 8  (predict for XP_040951829.1)
other 8  (predict for XP_040951830.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107901011
ghi-r.1
for
107942927
cit-r.1
for
102613848
vvi-u.5
for
100252571
sly-u.5
for
101268302
sot-r.1
for
102580976
nta-r.1
for
107791886
tae-r.2
for
123097024
bdi-r.1
for
100839326


Ortholog ID: 16185
Species ghi ghi cit vvi sly sot nta tae bdi
Symbol LOC107901011 LOC107942927 LOC102613848 LOC100252571 LOC101268302 LOC102580976 LOC107791886 LOC123097024 LOC100839326
Function* E3 ubiquitin ligase PQT3-like E3 ubiquitin ligase PQT3-like E3 ubiquitin ligase PQT3-like E3 ubiquitin ligase PARAQUAT TOLERANCE 3 E3 ubiquitin ligase PQT3-like E3 ubiquitin-protein ligase RBBP6-like uncharacterized LOC107791886 E3 ubiquitin ligase PQT3-like E3 ubiquitin-protein ligase RBBP6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107901011 107942927 102613848 100252571 101268302 102580976 107791886 123097024 100839326
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