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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100841072   uncharacterized LOC100841072 
 bdi-r.1   100823282   uncharacterized LOC100823282 
 hvu-r.1   123449595   uncharacterized LOC123449595 
 hvu-r.1   123402301   uncharacterized LOC123402301 
 osa-u.5   4348554   uncharacterized LOC4348554 
 zma-u.5   100192795   uncharacterized LOC100192795 
 sbi-r.1   8082027   general transcription factor IIE subunit 2 
 sbi-r.1   8072318   uncharacterized LOC8072318 
 ath-u.5   AT4G20330   Transcription initiation factor TFIIE, beta subunit 
 gma-u.5   100802433   general transcription factor IIE subunit 2 
 gma-u.5   100793998   general transcription factor IIE subunit 2 
 gma-u.5   100792075   transcription initiation factor IIE subunit beta 
 sly-u.5   101250226   uncharacterized LOC101250226 
 bra-r.6   103853535   transcription initiation factor IIE subunit beta 
 vvi-u.5   100261481   uncharacterized LOC100261481 
 vvi-u.5   100259920   uncharacterized LOC100259920 
 ppo-u.5   7478059   uncharacterized LOC7478059 
 mtr-u.5   25502025   general transcription factor IIE subunit 2 
 mtr-u.5   11443092   transcription initiation factor IIE subunit beta 
 ghi-r.1   107922749   general transcription factor IIE subunit 2 
 ghi-r.1   107926989   general transcription factor IIE subunit 2 
 ghi-r.1   107930064   general transcription factor IIE subunit 2 
 bna-r.1   106396961   transcription initiation factor IIE subunit beta-like 
 sot-r.1   102599084   uncharacterized LOC102599084 
 cit-r.1   102622567   uncharacterized LOC102622567 
 nta-r.1   107831153   uncharacterized LOC107831153 
 nta-r.1   107807528   uncharacterized LOC107807528 
 cre-r.1   CHLRE_12g512700v5   uncharacterized protein 

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Top 50 coexpressed genes to 100841072 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100841072 (bdi-r.1 coexpression data)

CoexMap"100841072"


bdiLOC100841072 | Entrez gene ID : 100841072      
Species bdi hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre tae
Paralog 2 2 1 1 2 1 3 1 1 2 1 2 3 1 1 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03022 [list] [network] Basal transcription factors (53 genes)
GO BP
GO:0006367 [list] [network] transcription initiation at RNA polymerase II promoter  (35 genes)  IEA  
GO CC
GO:0005673 [list] [network] transcription factor TFIIE complex  (4 genes)  IEA  
GO MF
Protein XP_003558687.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  nucl_plas 4,  cyto 2,  plas 1,  cyto_E.R. 1  (predict for XP_003558687.1)
Subcellular
localization
TargetP
mito 4,  chlo 3  (predict for XP_003558687.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100841072
bdi-r.1
for
100823282
hvu-r.1
for
123449595
hvu-r.1
for
123402301
osa-u.5
for
4348554
zma-u.5
for
100192795
sbi-r.1
for
8082027
sbi-r.1
for
8072318
ath-u.5
for
AT4G20330
gma-u.5
for
100802433
gma-u.5
for
100793998
gma-u.5
for
100792075
sly-u.5
for
101250226
bra-r.6
for
103853535
vvi-u.5
for
100261481
vvi-u.5
for
100259920
ppo-u.5
for
7478059
mtr-u.5
for
25502025
mtr-u.5
for
11443092
ghi-r.1
for
107922749
ghi-r.1
for
107926989
ghi-r.1
for
107930064
bna-r.1
for
106396961
sot-r.1
for
102599084
cit-r.1
for
102622567
nta-r.1
for
107831153
nta-r.1
for
107807528
cre-r.1
for
CHLRE_12g512700v5


Ortholog ID: 3480
Species bdi bdi tae hvu hvu osa zma sbi sbi ath gma gma gma sly bra vvi vvi ppo mtr mtr ghi ghi ghi bna bna sot cit nta nta cre
Symbol LOC100841072 LOC100823282 LOC123098635 LOC123449595 LOC123402301 LOC4348554 LOC100192795 LOC8082027 LOC8072318 AT4G20330 LOC100802433 LOC100792075 LOC100788089 LOC101250226 LOC103853535 LOC100261481 LOC100259920 LOC7478059 LOC25502025 LOC11443092 LOC107922749 LOC107926989 LOC107930064 LOC106396961 LOC106401615 LOC102599084 LOC102622567 LOC107831153 LOC107807528 CHLRE_12g512700v5
Function* uncharacterized LOC100841072 uncharacterized LOC100823282 uncharacterized LOC123098635 uncharacterized LOC123449595 uncharacterized LOC123402301 uncharacterized LOC4348554 uncharacterized LOC100192795 general transcription factor IIE subunit 2 uncharacterized LOC8072318 Transcription initiation factor TFIIE, beta subunit general transcription factor IIE subunit 2 transcription initiation factor IIE subunit beta transcription initiation factor IIE subunit beta-like uncharacterized LOC101250226 transcription initiation factor IIE subunit beta uncharacterized LOC100261481 uncharacterized LOC100259920 uncharacterized LOC7478059 general transcription factor IIE subunit 2 transcription initiation factor IIE subunit beta general transcription factor IIE subunit 2 general transcription factor IIE subunit 2 general transcription factor IIE subunit 2 transcription initiation factor IIE subunit beta-like transcription initiation factor IIE subunit beta uncharacterized LOC102599084 uncharacterized LOC102622567 uncharacterized LOC107831153 uncharacterized LOC107807528 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 6
bdi04144 Endocytosis 4
bdi04148 Efferocytosis 4
bdi04141 Protein processing in endoplasmic reticulum 3
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi04517 IgSF CAM signaling 2
bdi05100 Bacterial invasion of epithelial cells 2
bdi03050 Proteasome 2
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
tae00020 Citrate cycle (TCA cycle) 3
tae00310 Lysine degradation 3
tae00380 Tryptophan metabolism 3
tae00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 7
hvu04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 5
zma03008 Ribosome biogenesis in eukaryotes 2
zma04712 Circadian rhythm - plant 2
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
ath03040 Spliceosome 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 3
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01250 Biosynthesis of nucleotide sugars 2
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
vvi00190 Oxidative phosphorylation 2
vvi04142 Lysosome 2
vvi04145 Phagosome 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 6
mtr03022 Basal transcription factors 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 4
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 4
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 3
nta04075 Plant hormone signal transduction 3
nta04626 Plant-pathogen interaction 3
nta03008 Ribosome biogenesis in eukaryotes 2
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 3
nta04075 Plant hormone signal transduction 3
nta04626 Plant-pathogen interaction 3
nta03022 Basal transcription factors 2
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100841072 100823282 123098635 123449595 123402301 4348554 100192795 8082027 8072318 827781 100802433 100792075 100788089 101250226 103853535 100261481 100259920 7478059 25502025 11443092 107922749 107926989 107930064 106396961 106401615 102599084 102622567 107831153 107807528 5716609
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