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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100841478   26S proteasome non-ATPase regulatory subunit 9 
 tae-r.2   123112091   26S proteasome non-ATPase regulatory subunit 9 
 tae-r.2   123121621   26S proteasome non-ATPase regulatory subunit 9 
 tae-r.2   123103861   26S proteasome non-ATPase regulatory subunit 9 
 hvu-r.1   123398100   26S proteasome non-ATPase regulatory subunit 9 
 osa-u.5   4347083   uncharacterized LOC4347083 
 zma-u.5   100272678   uncharacterized LOC100272678 
 sbi-r.1   8060257   26S proteasome non-ATPase regulatory subunit 9 
 ath-u.5   AT5G57950   26S proteasome regulatory subunit 
 gma-u.5   100803329   probable 26S proteasome regulatory subunit p27 
 gma-u.5   100801569   probable 26S proteasome regulatory subunit p27 
 sly-u.5   101268879   uncharacterized LOC101268879 
 bra-r.6   103845234   26S proteasome non-ATPase regulatory subunit 9 
 vvi-u.5   100258659   uncharacterized LOC100258659 
 ppo-u.5   7485244   uncharacterized LOC7485244 
 mtr-u.5   25488374   26S proteasome non-ATPase regulatory subunit 9 
 ghi-r.1   121217576   26S proteasome non-ATPase regulatory subunit 9 
 ghi-r.1   107906888   26S proteasome non-ATPase regulatory subunit 9 
 bna-r.1   106426075   26S proteasome non-ATPase regulatory subunit 9 
 bna-r.1   106371570   26S proteasome non-ATPase regulatory subunit 9 
 sot-r.1   102586121   26S proteasome non-ATPase regulatory subunit 9 
 cit-r.1   102608226   uncharacterized LOC102608226 
 nta-r.1   107800024   uncharacterized LOC107800024 
 nta-r.1   107826660   uncharacterized LOC107826660 
 cre-r.1   CHLRE_04g226950v5   uncharacterized protein 

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Top 50 coexpressed genes to 100841478 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100841478 (bdi-r.1 coexpression data)

CoexMap"100841478"


bdiLOC100841478 | Entrez gene ID : 100841478      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03050 [list] [network] Proteasome (64 genes)
GO BP
GO:0070682 [list] [network] proteasome regulatory particle assembly  (1 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4615 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003578131.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  nucl 1  (predict for XP_003578131.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_003578131.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100841478
tae-r.2
for
123112091
tae-r.2
for
123121621
tae-r.2
for
123103861
hvu-r.1
for
123398100
osa-u.5
for
4347083
zma-u.5
for
100272678
sbi-r.1
for
8060257
ath-u.5
for
AT5G57950
gma-u.5
for
100803329
gma-u.5
for
100801569
sly-u.5
for
101268879
bra-r.6
for
103845234
vvi-u.5
for
100258659
ppo-u.5
for
7485244
mtr-u.5
for
25488374
ghi-r.1
for
121217576
ghi-r.1
for
107906888
bna-r.1
for
106426075
bna-r.1
for
106371570
sot-r.1
for
102586121
cit-r.1
for
102608226
nta-r.1
for
107800024
nta-r.1
for
107826660
cre-r.1
for
CHLRE_04g226950v5


Ortholog ID: 10405
Species bdi tae tae tae hvu osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100841478 LOC123112091 LOC123121621 LOC123103861 LOC123398100 LOC4347083 LOC100272678 LOC8060257 AT5G57950 LOC100803329 LOC100801569 LOC101268879 LOC103845234 LOC100258659 LOC7485244 LOC25488374 LOC121217576 LOC107906888 LOC106426075 LOC106371570 LOC102586121 LOC102608226 LOC107800024 LOC107826660 CHLRE_04g226950v5
Function* 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 uncharacterized LOC4347083 uncharacterized LOC100272678 26S proteasome non-ATPase regulatory subunit 9 26S proteasome regulatory subunit probable 26S proteasome regulatory subunit p27 probable 26S proteasome regulatory subunit p27 uncharacterized LOC101268879 26S proteasome non-ATPase regulatory subunit 9 uncharacterized LOC100258659 uncharacterized LOC7485244 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 uncharacterized LOC102608226 uncharacterized LOC107800024 uncharacterized LOC107826660 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 13
tae03040 Spliceosome 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 6
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 4
zma03008 Ribosome biogenesis in eukaryotes 3
zma03083 Polycomb repressive complex 3
zma03460 Fanconi anemia pathway 2
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03050 Proteasome 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma03050 Proteasome 2
gma03018 RNA degradation 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 5
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 5
bna03015 mRNA surveillance pathway 5
bna03040 Spliceosome 4
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 7
bna03015 mRNA surveillance pathway 7
bna03040 Spliceosome 4
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03013 Nucleocytoplasmic transport 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03018 RNA degradation 2
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta03420 Nucleotide excision repair 4
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 16
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100841478 123112091 123121621 123103861 123398100 4347083 100272678 8060257 835906 100803329 100801569 101268879 103845234 100258659 7485244 25488374 121217576 107906888 106426075 106371570 102586121 102608226 107800024 107826660 5717916
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