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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107906888   26S proteasome non-ATPase regulatory subunit 9 
 ghi-r.1   121217576   26S proteasome non-ATPase regulatory subunit 9 
 ath-u.5   AT5G57950   26S proteasome regulatory subunit 
 bra-r.6   103845234   26S proteasome non-ATPase regulatory subunit 9 
 bna-r.1   106371570   26S proteasome non-ATPase regulatory subunit 9 
 bna-r.1   106426075   26S proteasome non-ATPase regulatory subunit 9 
 cit-r.1   102608226   uncharacterized LOC102608226 
 gma-u.5   100803329   probable 26S proteasome regulatory subunit p27 
 gma-u.5   100801569   probable 26S proteasome regulatory subunit p27 
 vvi-u.5   100258659   uncharacterized LOC100258659 
 ppo-u.5   7485244   uncharacterized LOC7485244 
 mtr-u.5   25488374   26S proteasome non-ATPase regulatory subunit 9 
 sly-u.5   101268879   uncharacterized LOC101268879 
 sot-r.1   102586121   26S proteasome non-ATPase regulatory subunit 9 
 nta-r.1   107800024   uncharacterized LOC107800024 
 nta-r.1   107826660   uncharacterized LOC107826660 
 osa-u.5   4347083   uncharacterized LOC4347083 
 zma-u.5   100272678   uncharacterized LOC100272678 
 tae-r.2   123112091   26S proteasome non-ATPase regulatory subunit 9 
 tae-r.2   123103861   26S proteasome non-ATPase regulatory subunit 9 
 tae-r.2   123121621   26S proteasome non-ATPase regulatory subunit 9 
 hvu-r.1   123398100   26S proteasome non-ATPase regulatory subunit 9 
 sbi-r.1   8060257   26S proteasome non-ATPase regulatory subunit 9 
 bdi-r.1   100841478   26S proteasome non-ATPase regulatory subunit 9 
 cre-r.1   CHLRE_04g226950v5   uncharacterized protein 

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Top 50 coexpressed genes to 107906888 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107906888 (ghi-r.1 coexpression data)

CoexMap"107906888"


ghiLOC107906888 | Entrez gene ID : 107906888    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03050 [list] [network] Proteasome (162 genes)
GO BP
GO:0070682 [list] [network] proteasome regulatory particle assembly  (2 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040968916.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 3,  nucl 2,  cyto 2,  chlo_mito 2,  nucl_plas 2  (predict for XP_040968916.1)
Subcellular
localization
TargetP
other 7  (predict for XP_040968916.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107906888
ghi-r.1
for
121217576
ath-u.5
for
AT5G57950
bra-r.6
for
103845234
bna-r.1
for
106371570
bna-r.1
for
106426075
cit-r.1
for
102608226
gma-u.5
for
100803329
gma-u.5
for
100801569
vvi-u.5
for
100258659
ppo-u.5
for
7485244
mtr-u.5
for
25488374
sly-u.5
for
101268879
sot-r.1
for
102586121
nta-r.1
for
107800024
nta-r.1
for
107826660
osa-u.5
for
4347083
zma-u.5
for
100272678
tae-r.2
for
123112091
tae-r.2
for
123103861
tae-r.2
for
123121621
hvu-r.1
for
123398100
sbi-r.1
for
8060257
bdi-r.1
for
100841478
cre-r.1
for
CHLRE_04g226950v5


Ortholog ID: 10405
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107906888 LOC121217576 AT5G57950 LOC103845234 LOC106371570 LOC106426075 LOC102608226 LOC100803329 LOC100801569 LOC100258659 LOC7485244 LOC25488374 LOC101268879 LOC102586121 LOC107800024 LOC107826660 LOC4347083 LOC100272678 LOC123112091 LOC123103861 LOC123121621 LOC123398100 LOC8060257 LOC100841478 CHLRE_04g226950v5
Function* 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome regulatory subunit 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 uncharacterized LOC102608226 probable 26S proteasome regulatory subunit p27 probable 26S proteasome regulatory subunit p27 uncharacterized LOC100258659 uncharacterized LOC7485244 26S proteasome non-ATPase regulatory subunit 9 uncharacterized LOC101268879 26S proteasome non-ATPase regulatory subunit 9 uncharacterized LOC107800024 uncharacterized LOC107826660 uncharacterized LOC4347083 uncharacterized LOC100272678 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03050 Proteasome 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 5
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 7
bna03015 mRNA surveillance pathway 7
bna03040 Spliceosome 4
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 5
bna03015 mRNA surveillance pathway 5
bna03040 Spliceosome 4
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03013 Nucleocytoplasmic transport 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma03050 Proteasome 2
gma03018 RNA degradation 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03018 RNA degradation 2
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta03420 Nucleotide excision repair 4
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 4
zma03008 Ribosome biogenesis in eukaryotes 3
zma03083 Polycomb repressive complex 3
zma03460 Fanconi anemia pathway 2
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 13
tae03040 Spliceosome 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 6
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 16
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107906888 121217576 835906 103845234 106371570 106426075 102608226 100803329 100801569 100258659 7485244 25488374 101268879 102586121 107800024 107826660 4347083 100272678 123112091 123103861 123121621 123398100 8060257 100841478 5717916
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