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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100801569   probable 26S proteasome regulatory subunit p27 
 gma-r.7   100801569   probable 26S proteasome regulatory subunit p27 
 gma-m.5   100801569   probable 26S proteasome regulatory subunit p27 
 gma-u.5   100803329   probable 26S proteasome regulatory subunit p27 
 mtr-u.5   25488374   26S proteasome non-ATPase regulatory subunit 9 
 ppo-u.5   7485244   uncharacterized LOC7485244 
 ath-u.5   AT5G57950   26S proteasome regulatory subunit 
 vvi-u.5   100258659   uncharacterized LOC100258659 
 sly-u.5   101268879   uncharacterized LOC101268879 
 osa-u.5   4347083   uncharacterized LOC4347083 
 zma-u.5   100272678   uncharacterized LOC100272678 

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Top 50 coexpressed genes to 100801569 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100801569 (gma-u.5 coexpression data)

CoexMap"100801569"


gmaLOC100801569 | Entrez gene ID : 100801569      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03050 [list] [network] Proteasome (106 genes)
GO BP
GO:0070682 [list] [network] proteasome regulatory particle assembly  (2 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003527170.1 [sequence] [blastp]
XP_006582092.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  chlo 2  (predict for XP_003527170.1)
cyto 8,  chlo 2  (predict for XP_006582092.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003527170.1)
other 6  (predict for XP_006582092.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100801569

.
gma-r.7
for
100801569

.
gma-m.5
for
100801569

.
gma-u.5
for
100803329

.
mtr-u.5
for
25488374

.
ppo-u.5
for
7485244

.
ath-u.5
for
AT5G57950

.
vvi-u.5
for
100258659

.
sly-u.5
for
101268879

.
osa-u.5
for
4347083

.
zma-u.5
for
100272678

.


Ortholog ID: 10405
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G57950 LOC100803329 LOC100801569 LOC101268879 LOC4347083 LOC100272678 LOC103845234 LOC100258659 LOC7485244 LOC25488374 LOC123103861 LOC123112091 LOC123398100 LOC121217576 LOC107906888 LOC106426075 LOC106371570 CHLRE_04g226950v5 LOC8060257 LOC102586121 LOC102608226 LOC100841478 LOC107800024 LOC107826660
Function* 26S proteasome regulatory subunit probable 26S proteasome regulatory subunit p27 probable 26S proteasome regulatory subunit p27 uncharacterized LOC101268879 uncharacterized LOC4347083 uncharacterized LOC100272678 26S proteasome non-ATPase regulatory subunit 9 uncharacterized LOC100258659 uncharacterized LOC7485244 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 uncharacterized protein 26S proteasome non-ATPase regulatory subunit 9 26S proteasome non-ATPase regulatory subunit 9 uncharacterized LOC102608226 26S proteasome non-ATPase regulatory subunit 9 uncharacterized LOC107800024 uncharacterized LOC107826660
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03050 Proteasome 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma03050 Proteasome 2
gma03018 RNA degradation 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 4
zma03008 Ribosome biogenesis in eukaryotes 3
zma03083 Polycomb repressive complex 3
zma03460 Fanconi anemia pathway 2
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 5
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 13
tae03040 Spliceosome 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 5
bna03015 mRNA surveillance pathway 5
bna03040 Spliceosome 4
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 7
bna03015 mRNA surveillance pathway 7
bna03040 Spliceosome 4
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03013 Nucleocytoplasmic transport 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03018 RNA degradation 2
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta03420 Nucleotide excision repair 4
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835906 100803329 100801569 101268879 4347083 100272678 103845234 100258659 7485244 25488374 123103861 123112091 123398100 121217576 107906888 106426075 106371570 5717916 8060257 102586121 102608226 100841478 107800024 107826660
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