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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100842227   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 tae-r.2   123078165   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 tae-r.2   123069679   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 tae-r.2   123061092   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 hvu-r.1   123443508   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 osa-u.5   4325168   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 zma-u.5   100272400   uncharacterized LOC100272400 
 sbi-r.1   8074526   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 ath-u.5   CLPR4   CLP protease R subunit 4 
 gma-u.5   100785827   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic-like 
 gma-u.5   100780029   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 sly-u.5   101247052   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 bra-r.6   103868942   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 bra-r.6   103860891   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 vvi-u.5   100855178   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 ppo-u.5   18096891   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 mtr-u.5   25493594   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 ghi-r.1   107915418   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic-like 
 ghi-r.1   107950095   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 ghi-r.1   107946693   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 bna-r.1   106440262   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic-like 
 bna-r.1   106375887   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 bna-r.1   106425454   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 sot-r.1   102591717   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 cit-r.1   102629735   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic-like 
 cit-r.1   102627265   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 nta-r.1   107831804   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 nta-r.1   107790385   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 cre-r.1   CHLRE_03g204350v5   uncharacterized protein 

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Top 50 coexpressed genes to 100842227 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100842227 (bdi-r.1 coexpression data)

CoexMap"100842227"


bdiLOC100842227 | Entrez gene ID : 100842227      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 2 1 2 1 1 1 3 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006515 [list] [network] protein quality control for misfolded or incompletely synthesized proteins  (15 genes)  IEA  
GO CC
GO:0009368 [list] [network] endopeptidase Clp complex  (10 genes)  IEA  
GO MF
GO:0051117 [list] [network] ATPase binding  (14 genes)  IEA  
GO:0004176 [list] [network] ATP-dependent peptidase activity  (25 genes)  IEA  
GO:0004252 [list] [network] serine-type endopeptidase activity  (117 genes)  IEA  
Protein XP_003566950.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 2,  mito 1  (predict for XP_003566950.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003566950.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100842227
tae-r.2
for
123078165
tae-r.2
for
123069679
tae-r.2
for
123061092
hvu-r.1
for
123443508
osa-u.5
for
4325168
zma-u.5
for
100272400
sbi-r.1
for
8074526
ath-u.5
for
CLPR4
gma-u.5
for
100785827
gma-u.5
for
100780029
sly-u.5
for
101247052
bra-r.6
for
103868942
bra-r.6
for
103860891
vvi-u.5
for
100855178
ppo-u.5
for
18096891
mtr-u.5
for
25493594
ghi-r.1
for
107915418
ghi-r.1
for
107950095
ghi-r.1
for
107946693
bna-r.1
for
106440262
bna-r.1
for
106375887
bna-r.1
for
106425454
sot-r.1
for
102591717
cit-r.1
for
102629735
cit-r.1
for
102627265
nta-r.1
for
107831804
nta-r.1
for
107790385
cre-r.1
for
CHLRE_03g204350v5


Ortholog ID: 7277
Species bdi tae tae tae hvu osa zma sbi ath gma gma sly bra bra vvi ppo mtr ghi ghi ghi bna bna bna sot cit cit nta nta cre
Symbol LOC100842227 LOC123078165 LOC123069679 LOC123061092 LOC123443508 LOC4325168 LOC100272400 LOC8074526 CLPR4 LOC100785827 LOC100780029 LOC101247052 LOC103868942 LOC103860891 LOC100855178 LOC18096891 LOC25493594 LOC107915418 LOC107950095 LOC107939884 LOC106440262 LOC106425454 LOC106440142 LOC102591717 LOC102629735 LOC102627265 LOC107831804 LOC107790385 CHLRE_03g204350v5
Function* ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic uncharacterized LOC100272400 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic CLP protease R subunit 4 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic-like ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic-like ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic-like ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic-like ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 2
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 2
ath00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma00450 Selenocompound metabolism 4
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 3
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00340 Histidine metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 4
bna03060 Protein export 2
bna00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 4
bna00230 Purine metabolism 2
bna00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 5
bna00740 Riboflavin metabolism 3
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 3
nta00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 3
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
nta01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100842227 123078165 123069679 123061092 123443508 4325168 100272400 8074526 827412 100785827 100780029 101247052 103868942 103860891 100855178 18096891 25493594 107915418 107950095 107939884 106440262 106425454 106440142 102591717 102629735 102627265 107831804 107790385 5718870
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