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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100272400   uncharacterized LOC100272400 
 zma-r.6   100272400   uncharacterized LOC100272400 
 osa-u.5   4325168   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 ath-u.5   CLPR4   CLP protease R subunit 4 
 gma-u.5   100785827   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic-like 
 gma-u.5   100780029   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 sly-u.5   101247052   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 vvi-u.5   100855178   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 ppo-u.5   18096891   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 
 mtr-u.5   25493594   ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 

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Top 50 coexpressed genes to 100272400 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100272400 (zma-u.5 coexpression data)

CoexMap"100272400"


zmaLOC100272400 | Entrez gene ID : 100272400      
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006515 [list] [network] protein quality control for misfolded or incompletely synthesized proteins  (20 genes)  IEA  
GO CC
GO:0009368 [list] [network] endopeptidase Clp complex  (13 genes)  IEA  
GO MF
GO:0051117 [list] [network] ATPase binding  (20 genes)  IEA  
GO:0004176 [list] [network] ATP-dependent peptidase activity  (36 genes)  IEA  
GO:0004252 [list] [network] serine-type endopeptidase activity  (139 genes)  IEA  
Protein NP_001140352.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  cyto 2  (predict for NP_001140352.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001140352.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100272400
zma-r.6
for
100272400
osa-u.5
for
4325168
ath-u.5
for
CLPR4
gma-u.5
for
100785827
gma-u.5
for
100780029
sly-u.5
for
101247052
vvi-u.5
for
100855178
ppo-u.5
for
18096891
mtr-u.5
for
25493594


Ortholog ID: 7277
Species zma sbi osa tae tae hvu bdi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna sot cit cit nta nta cre
Symbol LOC100272400 LOC8074526 LOC4325168 LOC123078165 LOC123061092 LOC123443508 LOC100842227 CLPR4 LOC100785827 LOC100780029 LOC101247052 LOC103868942 LOC103860891 LOC100855178 LOC18096891 LOC25493594 LOC107950095 LOC107939884 LOC106440262 LOC106425454 LOC102591717 LOC102629735 LOC102627265 LOC107790385 LOC107831804 CHLRE_03g204350v5
Function* uncharacterized LOC100272400 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic CLP protease R subunit 4 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic-like ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic-like ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic-like ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 2
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 2
ath00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma00450 Selenocompound metabolism 4
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 3
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00340 Histidine metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 4
bna03060 Protein export 2
bna00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 4
bna00230 Purine metabolism 2
bna00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 3
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
nta01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 3
nta00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100272400 8074526 4325168 123078165 123061092 123443508 100842227 827412 100785827 100780029 101247052 103868942 103860891 100855178 18096891 25493594 107950095 107939884 106440262 106425454 102591717 102629735 102627265 107790385 107831804 5718870
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