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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   104584753   pentatricopeptide repeat-containing protein At5g16860 
 tae-r.2   123077407   pentatricopeptide repeat-containing protein At5g16860 
 tae-r.2   123060355   pentatricopeptide repeat-containing protein At5g16860 
 hvu-r.1   123442887   pentatricopeptide repeat-containing protein At5g16860 
 osa-u.5   4335187   pentatricopeptide repeat-containing protein At5g16860 
 osa-u.5   4338363   pentatricopeptide repeat-containing protein At5g16860 
 zma-u.5   100384813   uncharacterized LOC100384813 
 sbi-r.1   8071194   pentatricopeptide repeat-containing protein At5g16860 
 ath-u.5   AT5G16860   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100775879   pentatricopeptide repeat-containing protein At5g16860 
 sly-u.5   101263591   pentatricopeptide repeat-containing protein At5g16860 
 bra-r.6   103846285   pentatricopeptide repeat-containing protein At5g16860 
 vvi-u.5   100248312   pentatricopeptide repeat-containing protein At5g16860 
 mtr-u.5   25482904   pentatricopeptide repeat-containing protein At5g16860 
 ghi-r.1   107897341   pentatricopeptide repeat-containing protein At5g16860 
 ghi-r.1   107914368   pentatricopeptide repeat-containing protein At5g16860 
 sot-r.1   102597823   pentatricopeptide repeat-containing protein At5g16860 
 cit-r.1   102607034   pentatricopeptide repeat-containing protein At5g16860 
 nta-r.1   107790901   pentatricopeptide repeat-containing protein At5g16860-like 
 nta-r.1   107804484   pentatricopeptide repeat-containing protein At5g16860-like 

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Top 50 coexpressed genes to 104584753 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 104584753 (bdi-r.1 coexpression data)

CoexMap"104584753"


bdiLOC104584753 | Entrez gene ID : 104584753      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi mtr ghi sot cit nta ppo bna cre
Paralog 1 2 1 2 1 1 1 1 1 1 1 1 2 1 1 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (707 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_010238621.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 2,  mito 1,  plas 1,  mito_plas 1  (predict for XP_010238621.1)
Subcellular
localization
TargetP
other 3  (predict for XP_010238621.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
104584753
tae-r.2
for
123077407
tae-r.2
for
123060355
hvu-r.1
for
123442887
osa-u.5
for
4335187
osa-u.5
for
4338363
zma-u.5
for
100384813
sbi-r.1
for
8071194
ath-u.5
for
AT5G16860
gma-u.5
for
100775879
sly-u.5
for
101263591
bra-r.6
for
103846285
vvi-u.5
for
100248312
mtr-u.5
for
25482904
ghi-r.1
for
107897341
ghi-r.1
for
107914368
sot-r.1
for
102597823
cit-r.1
for
102607034
nta-r.1
for
107790901
nta-r.1
for
107804484


Ortholog ID: 9668
Species bdi tae tae hvu osa osa zma sbi ath gma sly bra vvi mtr ghi ghi sot cit nta nta
Symbol LOC104584753 LOC123077407 LOC123060355 LOC123442887 LOC4335187 LOC4338363 LOC100384813 LOC8071194 AT5G16860 LOC100775879 LOC101263591 LOC103846285 LOC100248312 LOC25482904 LOC107914368 LOC121208178 LOC102597823 LOC102607034 LOC107790901 LOC107804484
Function* pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 uncharacterized LOC100384813 pentatricopeptide repeat-containing protein At5g16860 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860-like pentatricopeptide repeat-containing protein At5g16860-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta00540 Lipopolysaccharide biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 104584753 123077407 123060355 123442887 4335187 4338363 100384813 8071194 831549 100775879 101263591 103846285 100248312 25482904 107914368 121208178 102597823 102607034 107790901 107804484
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