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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100384813   uncharacterized LOC100384813 
 zma-r.6   100384813   uncharacterized LOC100384813 
 osa-u.5   4335187   pentatricopeptide repeat-containing protein At5g16860 
 osa-u.5   4338363   pentatricopeptide repeat-containing protein At5g16860 
 ath-u.5   AT5G16860   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100775879   pentatricopeptide repeat-containing protein At5g16860 
 sly-u.5   101263591   pentatricopeptide repeat-containing protein At5g16860 
 vvi-u.5   100248312   pentatricopeptide repeat-containing protein At5g16860 
 mtr-u.5   25482904   pentatricopeptide repeat-containing protein At5g16860 

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Top 50 coexpressed genes to 100384813 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100384813 (zma-u.5 coexpression data)

CoexMap"100384813"


zmaLOC100384813 | Entrez gene ID : 100384813      
Species zma osa ath gma sly vvi mtr sot hvu tae cit sbi ppo ghi cre bna nta bdi bra
Paralog 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (350 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (807 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein XP_008662262.1 [sequence] [blastp]
XP_008662263.1 [sequence] [blastp]
XP_008662265.1 [sequence] [blastp]
XP_008662266.1 [sequence] [blastp]
XP_008662267.1 [sequence] [blastp]
XP_008662268.1 [sequence] [blastp]
XP_008662269.1 [sequence] [blastp]
XP_008662270.1 [sequence] [blastp]
XP_008662271.1 [sequence] [blastp]
XP_020400794.1 [sequence] [blastp]
XP_020400795.1 [sequence] [blastp]
XP_035819454.1 [sequence] [blastp]
XP_035819455.1 [sequence] [blastp]
XP_035819456.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  cyto 3,  plas 3,  cyto_plas 3  (predict for XP_008662262.1)
chlo 3,  cyto 3,  plas 3,  cyto_plas 3  (predict for XP_008662263.1)
chlo 3,  cyto 3,  plas 3,  cyto_plas 3  (predict for XP_008662265.1)
chlo 3,  cyto 3,  plas 3,  cyto_plas 3  (predict for XP_008662266.1)
chlo 3,  cyto 3,  plas 3,  cyto_plas 3  (predict for XP_008662267.1)
chlo 3,  cyto 3,  plas 3,  cyto_plas 3  (predict for XP_008662268.1)
chlo 3,  cyto 3,  plas 3,  cyto_plas 3  (predict for XP_008662269.1)
chlo 3,  cyto 3,  plas 3,  cyto_plas 3  (predict for XP_008662270.1)
chlo 3,  cyto 3,  plas 3,  cyto_plas 3  (predict for XP_008662271.1)
chlo 3,  cyto 3,  plas 3,  cyto_plas 3  (predict for XP_020400794.1)
chlo 3,  cyto 3,  plas 3,  cyto_plas 3  (predict for XP_020400795.1)
chlo 3,  cyto 3,  plas 3,  cyto_plas 3  (predict for XP_035819454.1)
chlo 3,  cyto 3,  plas 3,  cyto_plas 3  (predict for XP_035819455.1)
chlo 3,  cyto 3,  plas 3,  cyto_plas 3  (predict for XP_035819456.1)
Subcellular
localization
TargetP
mito 1  (predict for XP_008662262.1)
mito 1  (predict for XP_008662263.1)
mito 1  (predict for XP_008662265.1)
mito 1  (predict for XP_008662266.1)
mito 1  (predict for XP_008662267.1)
mito 1  (predict for XP_008662268.1)
mito 1  (predict for XP_008662269.1)
mito 1  (predict for XP_008662270.1)
mito 1  (predict for XP_008662271.1)
mito 1  (predict for XP_020400794.1)
mito 1  (predict for XP_020400795.1)
mito 1  (predict for XP_035819454.1)
mito 1  (predict for XP_035819455.1)
mito 1  (predict for XP_035819456.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100384813

.
zma-r.6
for
100384813

.
osa-u.5
for
4335187

.
osa-u.5
for
4338363

.
ath-u.5
for
AT5G16860

.
gma-u.5
for
100775879

.
sly-u.5
for
101263591

.
vvi-u.5
for
100248312

.
mtr-u.5
for
25482904

.


Ortholog ID: 9668
Species ath gma sly osa osa zma bra vvi mtr tae tae hvu ghi sbi sot cit bdi nta nta
Symbol AT5G16860 LOC100775879 LOC101263591 LOC4335187 LOC4338363 LOC100384813 LOC103846285 LOC100248312 LOC25482904 LOC123077407 LOC123060355 LOC123442887 LOC121208178 LOC8071194 LOC102597823 LOC102607034 LOC104584753 LOC107790901 LOC107804484
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 uncharacterized LOC100384813 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860-like pentatricopeptide repeat-containing protein At5g16860-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta00540 Lipopolysaccharide biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831549 100775879 101263591 4335187 4338363 100384813 103846285 100248312 25482904 123077407 123060355 123442887 121208178 8071194 102597823 102607034 104584753 107790901 107804484
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