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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  121208178  pentatricopeptide repeat-containing protein At5g16860 
 ath-u.5  AT5G16860  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100775879  pentatricopeptide repeat-containing protein At5g16860 
 vvi-u.5  100248312  pentatricopeptide repeat-containing protein At5g16860 
 mtr-u.5  25482904  pentatricopeptide repeat-containing protein At5g16860 
 sly-u.5  101263591  pentatricopeptide repeat-containing protein At5g16860 
 osa-u.5  4335187  pentatricopeptide repeat-containing protein At5g16860 
 osa-u.5  4338363  pentatricopeptide repeat-containing protein At5g16860 
 zma-u.5  100384813  uncharacterized LOC100384813 

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Top 50 coexpressed genes to 121208178 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121208178 (ghi-r.1 coexpression data)

CoexMap"121208178"


ghiLOC121208178 | Entrez gene ID : 121208178
Species ghi ath gma vvi mtr sly osa zma bdi hvu bra cit bna ppo sbi sot nta cre tae
Paralog 1 1 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040934624.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_040934624.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_040934624.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
121208178


ath-u.5
for
AT5G16860


gma-u.5
for
100775879


vvi-u.5
for
100248312


mtr-u.5
for
25482904


sly-u.5
for
101263591


osa-u.5
for
4335187


osa-u.5
for
4338363


zma-u.5
for
100384813



Ortholog ID: 9668
Species ghi ath bra cit gma vvi mtr sly sot nta nta osa osa zma tae tae hvu sbi bdi
Symbol LOC121208178 AT5G16860 LOC103846285 LOC102607034 LOC100775879 LOC100248312 LOC25482904 LOC101263591 LOC102597823 LOC107790901 LOC107804484 LOC4335187 LOC4338363 LOC100384813 LOC123077407 LOC123060355 LOC123442887 LOC8071194 LOC104584753
Function* pentatricopeptide repeat-containing protein At5g16860 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860-like pentatricopeptide repeat-containing protein At5g16860-like pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 uncharacterized LOC100384813 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121208178 831549 103846285 102607034 100775879 100248312 25482904 101263591 102597823 107790901 107804484 4335187 4338363 100384813 123077407 123060355 123442887 8071194 104584753
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