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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2  123060355  pentatricopeptide repeat-containing protein At5g16860 
 osa-u.5  4335187  pentatricopeptide repeat-containing protein At5g16860 
 osa-u.5  4338363  pentatricopeptide repeat-containing protein At5g16860 
 zma-u.5  100384813  uncharacterized LOC100384813 
 ath-u.5  AT5G16860  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100775879  pentatricopeptide repeat-containing protein At5g16860 
 sly-u.5  101263591  pentatricopeptide repeat-containing protein At5g16860 
 vvi-u.5  100248312  pentatricopeptide repeat-containing protein At5g16860 
 mtr-u.5  25482904  pentatricopeptide repeat-containing protein At5g16860 

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Top 50 coexpressed genes to 123060355 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123060355 (tae-r.2 coexpression data)

CoexMap"123060355"


taeLOC123060355 | Entrez gene ID : 123060355
Species tae osa zma ath gma sly vvi mtr hvu cit bra ghi ppo sbi bdi nta bna cre sot
Paralog 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2838 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044338977.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_044338977.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_044338977.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

tae-r.2
for
123060355


osa-u.5
for
4335187


osa-u.5
for
4338363


zma-u.5
for
100384813


ath-u.5
for
AT5G16860


gma-u.5
for
100775879


sly-u.5
for
101263591


vvi-u.5
for
100248312


mtr-u.5
for
25482904



Ortholog ID: 9668
Species tae tae hvu bdi osa osa zma sbi ath gma sly bra vvi mtr ghi sot cit nta nta
Symbol LOC123077407 LOC123060355 LOC123442887 LOC104584753 LOC4335187 LOC4338363 LOC100384813 LOC8071194 AT5G16860 LOC100775879 LOC101263591 LOC103846285 LOC100248312 LOC25482904 LOC121208178 LOC102597823 LOC102607034 LOC107790901 LOC107804484
Function* pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 uncharacterized LOC100384813 pentatricopeptide repeat-containing protein At5g16860 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860 pentatricopeptide repeat-containing protein At5g16860-like pentatricopeptide repeat-containing protein At5g16860-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta00540 Lipopolysaccharide biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123077407 123060355 123442887 104584753 4335187 4338363 100384813 8071194 831549 100775879 101263591 103846285 100248312 25482904 121208178 102597823 102607034 107790901 107804484
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