ATTED-II : GeneCoexpression result

Species	Gene	Description
cit-r.1	102618340	flap endonuclease 1
ath-u.5	AT5G26680	5'-3' exonuclease family protein
ghi-r.1	107916254	flap endonuclease 1
ghi-r.1	107896560	flap endonuclease 1
bna-r.1	106348720	flap endonuclease 1
bna-r.1	106348586	flap endonuclease 1
gma-u.5	100808044	flap endonuclease 1-like
gma-u.5	100792878	flap endonuclease 1-like
vvi-u.5	100242559	flap endonuclease 1
ppo-u.5	18103998	flap endonuclease 1
mtr-u.5	11412823	flap endonuclease 1
sly-u.5	101268807	flap endonuclease 1
sot-r.1	102602982	flap endonuclease 1
nta-r.1	107791227	flap endonuclease 1
nta-r.1	107821943	flap endonuclease 1-like
osa-u.5	FEN1A	flap endonuclease 1-A-like
zma-u.5	732817	Flap endonuclease 1
tae-r.2	123142727	flap endonuclease 1-A
tae-r.2	123065100	flap endonuclease 1-A
tae-r.2	123182819	flap endonuclease 1-A
hvu-r.1	123448231	flap endonuclease 1-A
sbi-r.1	8061074	flap endonuclease 1-A
bdi-r.1	100826850	flap endonuclease 1-A
cre-r.1	CHLRE_03g145687v5	uncharacterized protein

Annotation

functional annotation

KEGG

cit03030 [list] [network] DNA replication (39 genes)

cit03410 [list] [network] Base excision repair (45 genes)

cit03450 [list] [network] Non-homologous end-joining (8 genes)

GO BP

GO CC

GO MF

GO:0017108 [list] [network] 5'-flap endonuclease activity	(12 genes)	IEA
GO:0008409 [list] [network] 5'-3' exonuclease activity	(15 genes)	IEA
GO:0003677 [list] [network] DNA binding	(1476 genes)	IEA

Protein

XP_006480329.1 [sequence] [blastp]
XP_006480333.1 [sequence] [blastp]
XP_015386432.1 [sequence] [blastp]
XP_015386433.1 [sequence] [blastp]
XP_024956059.1 [sequence] [blastp]
XP_052299646.1 [sequence] [blastp]
XP_052299647.1 [sequence] [blastp]
XP_052299648.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 4, cysk 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2	(predict for XP_006480329.1)
cyto 7, nucl 2	(predict for XP_006480333.1)
cyto 4, nucl 3, plas 1, E.R. 1, cysk_nucl 1, E.R._plas 1	(predict for XP_015386432.1)
nucl 6, cyto 2, mito 1, E.R. 1, pero 1	(predict for XP_015386433.1)
cyto 4, nucl 3, plas 1, E.R. 1, cysk_nucl 1, E.R._plas 1	(predict for XP_024956059.1)
cyto 4, nucl 3, plas 1, E.R. 1, cysk_nucl 1, E.R._plas 1	(predict for XP_052299646.1)
cyto 4, nucl 3, plas 1, E.R. 1, cysk_nucl 1, E.R._plas 1	(predict for XP_052299647.1)
cyto 5, nucl 3, cysk 2	(predict for XP_052299648.1)

Subcellular
localization
TargetP

other 8	(predict for XP_006480329.1)
other 8	(predict for XP_006480333.1)
other 9	(predict for XP_015386432.1)
other 9	(predict for XP_015386433.1)
other 9	(predict for XP_024956059.1)
other 9	(predict for XP_052299646.1)
other 9	(predict for XP_052299647.1)
other 8	(predict for XP_052299648.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102618340	ath-u.5 for AT5G26680	ghi-r.1 for 107916254	ghi-r.1 for 107896560	bna-r.1 for 106348720	bna-r.1 for 106348586	gma-u.5 for 100808044	gma-u.5 for 100792878	vvi-u.5 for 100242559	ppo-u.5 for 18103998	mtr-u.5 for 11412823	sly-u.5 for 101268807	sot-r.1 for 102602982	nta-r.1 for 107791227	nta-r.1 for 107821943	osa-u.5 for FEN1A	zma-u.5 for 732817	tae-r.2 for 123142727	tae-r.2 for 123065100	tae-r.2 for 123182819	hvu-r.1 for 123448231	sbi-r.1 for 8061074	bdi-r.1 for 100826850	cre-r.1 for CHLRE_03g145687v5

Ortholog

Ortholog ID: 10329

Species

cit

ath

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

FEN1A

Function^*

flap endonuclease 1

5'-3' exonuclease family protein

flap endonuclease 1

flap endonuclease 1-like

flap endonuclease 1

flap endonuclease 1-like

flap endonuclease 1-A-like

Flap endonuclease 1

flap endonuclease 1-A

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	2
cit00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03030	DNA replication	7
ath03410	Base excision repair	6
ath03430	Mismatch repair	5
ath03420	Nucleotide excision repair	5
ath03440	Homologous recombination	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	4
ghi03410	Base excision repair	4
ghi03420	Nucleotide excision repair	2
ghi03430	Mismatch repair	2
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	4
ghi03410	Base excision repair	4
ghi03420	Nucleotide excision repair	2
ghi03430	Mismatch repair	2
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03030	DNA replication	2
bna03410	Base excision repair	2
bna03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4
bna03030	DNA replication	2
bna03410	Base excision repair	2
bna03450	Non-homologous end-joining	2
bna00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	8
gma03410	Base excision repair	6
gma03420	Nucleotide excision repair	5
gma03430	Mismatch repair	5
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	3
gma03008	Ribosome biogenesis in eukaryotes	3
gma03030	DNA replication	2
gma03410	Base excision repair	2
gma03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04814	Motor proteins	3
vvi03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	4
mtr03030	DNA replication	3
mtr03420	Nucleotide excision repair	2
mtr03430	Mismatch repair	2
mtr03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03030	DNA replication	5
sly03410	Base excision repair	3
sly03420	Nucleotide excision repair	2
sly03430	Mismatch repair	2
sly03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03030	DNA replication	2
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03030	DNA replication	2
nta03410	Base excision repair	2
nta03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03460	Fanconi anemia pathway	2
nta03030	DNA replication	2
nta03410	Base excision repair	2
nta03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00970	Aminoacyl-tRNA biosynthesis	4
osa03410	Base excision repair	2
osa03082	ATP-dependent chromatin remodeling	2
osa03013	Nucleocytoplasmic transport	2
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03030	DNA replication	3
zma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4
tae03030	DNA replication	3
tae03410	Base excision repair	3
tae03450	Non-homologous end-joining	3
tae00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	7
tae03040	Spliceosome	6
tae03030	DNA replication	3
tae03410	Base excision repair	3
tae03450	Non-homologous end-joining	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	6
tae03030	DNA replication	3
tae03410	Base excision repair	3
tae03450	Non-homologous end-joining	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	8
hvu04120	Ubiquitin mediated proteolysis	2
hvu03030	DNA replication	2
hvu03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03410	Base excision repair	3
bdi03008	Ribosome biogenesis in eukaryotes	2
bdi03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03030	DNA replication	8
cre03410	Base excision repair	7
cre03420	Nucleotide excision repair	7
cre03430	Mismatch repair	7
cre03440	Homologous recombination	2

Expression

Expression pattern

Entrez Gene ID^*

102618340

832721

107916254

107896560

106348720

106348586

100808044

100792878

100242559

18103998

11412823

101268807

102602982

107791227

107821943

4339464

732817

123142727

123065100

123182819

123448231

8061074

100826850

5721250

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102618340 (cit-r.1 coexpression data)

Top 50 enrichment test to 102618340 (cit-r.1 coexpression data)


Species	cit	ath	ghi	bna	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre	bra
Paralog	1	1	2	2	2	1	1	1	1	1	2	1	1	3	1	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102618340 (cit-r.1 coexpression data)

Top 50 enrichment test to 102618340 (cit-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**