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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g145687v5   uncharacterized protein 
 ath-u.5   AT5G26680   5'-3' exonuclease family protein 
 gma-u.5   100808044   flap endonuclease 1-like 
 gma-u.5   100792878   flap endonuclease 1-like 
 sly-u.5   101268807   flap endonuclease 1 
 osa-u.5   FEN1A   flap endonuclease 1-A-like 
 zma-u.5   732817   Flap endonuclease 1 
 vvi-u.5   100242559   flap endonuclease 1 
 ppo-u.5   18103998   flap endonuclease 1 
 mtr-u.5   11412823   flap endonuclease 1 

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Top 50 coexpressed genes to CHLRE_03g145687v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g145687v5 (cre-r.1 coexpression data)

CoexMap"5721250"


creCHLRE_03g145687v5 | Entrez gene ID : 5721250      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03030 [list] [network] DNA replication (30 genes)
cre03410 [list] [network] Base excision repair (25 genes)
cre03450 [list] [network] Non-homologous end-joining (4 genes)
GO BP
GO CC
GO MF
GO:0017108 [list] [network] 5'-flap endonuclease activity  (10 genes)  IEA  
GO:0008409 [list] [network] 5'-3' exonuclease activity  (11 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (670 genes)  IEA  
Protein XP_001695720.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 2,  mito 2,  nucl_plas 2  (predict for XP_001695720.1)
Subcellular
localization
TargetP
other 9  (predict for XP_001695720.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g145687v5

.
ath-u.5
for
AT5G26680

.
gma-u.5
for
100808044

.
gma-u.5
for
100792878

.
sly-u.5
for
101268807

.
osa-u.5
for
FEN1A

.
zma-u.5
for
732817

.
vvi-u.5
for
100242559

.
ppo-u.5
for
18103998

.
mtr-u.5
for
11412823

.


Ortholog ID: 10329
Species ath gma gma sly osa zma vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G26680 LOC100792878 LOC100808044 LOC101268807 FEN1A LOC732817 LOC100242559 LOC18103998 LOC11412823 LOC123065100 LOC123142727 LOC123448231 LOC107916254 LOC107896560 LOC106348586 LOC106348720 CHLRE_03g145687v5 LOC8061074 LOC102602982 LOC102618340 LOC100826850 LOC107821943 LOC107791227
Function* 5'-3' exonuclease family protein flap endonuclease 1-like flap endonuclease 1-like flap endonuclease 1 flap endonuclease 1-A-like Flap endonuclease 1 flap endonuclease 1 flap endonuclease 1 flap endonuclease 1 flap endonuclease 1-A flap endonuclease 1-A flap endonuclease 1-A flap endonuclease 1 flap endonuclease 1 flap endonuclease 1 flap endonuclease 1 uncharacterized protein flap endonuclease 1-A flap endonuclease 1 flap endonuclease 1 flap endonuclease 1-A flap endonuclease 1-like flap endonuclease 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 7
ath03410 Base excision repair 6
ath03430 Mismatch repair 5
ath03420 Nucleotide excision repair 5
ath03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03008 Ribosome biogenesis in eukaryotes 3
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 8
gma03410 Base excision repair 6
gma03420 Nucleotide excision repair 5
gma03430 Mismatch repair 5
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 5
sly03410 Base excision repair 3
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 4
osa03410 Base excision repair 2
osa03082 ATP-dependent chromatin remodeling 2
osa03013 Nucleocytoplasmic transport 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 3
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04814 Motor proteins 3
vvi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03030 DNA replication 3
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03040 Spliceosome 6
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03450 Non-homologous end-joining 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03450 Non-homologous end-joining 3
tae00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 8
hvu04120 Ubiquitin mediated proteolysis 2
hvu03030 DNA replication 2
hvu03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
ghi03410 Base excision repair 4
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
ghi03410 Base excision repair 4
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna03030 DNA replication 2
bna03410 Base excision repair 2
bna03450 Non-homologous end-joining 2
bna00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 2
bna03410 Base excision repair 2
bna03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 8
cre03410 Base excision repair 7
cre03420 Nucleotide excision repair 7
cre03430 Mismatch repair 7
cre03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
cit00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03410 Base excision repair 3
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03450 Non-homologous end-joining 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832721 100792878 100808044 101268807 4339464 732817 100242559 18103998 11412823 123065100 123142727 123448231 107916254 107896560 106348586 106348720 5721250 8061074 102602982 102618340 100826850 107821943 107791227
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