ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cit-r.1	102623949	PH, RCC1 and FYVE domains-containing protein 1
cit-r.1	102630015	PH, RCC1 and FYVE domains-containing protein 1-like
cit-r.1	102629590	PH, RCC1 and FYVE domains-containing protein 1
cit-r.1	102623335	PH, RCC1 and FYVE domains-containing protein 1
ath-u.5	AT5G12350	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
ath-u.5	AT5G19420	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
ath-u.5	AT1G65920	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
bra-r.6	103856379	PH, RCC1 and FYVE domains-containing protein 1
bra-r.6	103845756	PH, RCC1 and FYVE domains-containing protein 1
ghi-r.1	107891452	PH, RCC1 and FYVE domains-containing protein 1
ghi-r.1	107895189	PH, RCC1 and FYVE domains-containing protein 1
ghi-r.1	107912868	PH, RCC1 and FYVE domains-containing protein 1
bna-r.1	106434266	PH, RCC1 and FYVE domains-containing protein 1-like
bna-r.1	106403596	PH, RCC1 and FYVE domains-containing protein 1-like
gma-u.5	100797527	PH, RCC1 and FYVE domains-containing protein 1
gma-u.5	100806439	PH, RCC1 and FYVE domains-containing protein 1
gma-u.5	100791947	PH, RCC1 and FYVE domains-containing protein 1
vvi-u.5	100243300	PH, RCC1 and FYVE domains-containing protein 1
vvi-u.5	100253065	PH, RCC1 and FYVE domains-containing protein 1
vvi-u.5	100244665	PH, RCC1 and FYVE domains-containing protein 1
ppo-u.5	7496775	PH, RCC1 and FYVE domains-containing protein 1
ppo-u.5	18106548	PH, RCC1 and FYVE domains-containing protein 1
mtr-u.5	11425815	PH, RCC1 and FYVE domains-containing protein 1
mtr-u.5	11406734	PH, RCC1 and FYVE domains-containing protein 1
sly-u.5	101262813	PH, RCC1 and FYVE domains-containing protein 1-like
sly-u.5	101265608	PH, RCC1 and FYVE domains-containing protein 1
sly-u.5	101267670	PH, RCC1 and FYVE domains-containing protein 1
sot-r.1	102600493	uncharacterized LOC102600493
sot-r.1	102590844	uncharacterized LOC102590844
sot-r.1	102588539	uncharacterized LOC102588539
nta-r.1	107807728	PH, RCC1 and FYVE domains-containing protein 1-like
nta-r.1	107806494	PH, RCC1 and FYVE domains-containing protein 1-like
nta-r.1	107799299	PH, RCC1 and FYVE domains-containing protein 1-like
osa-u.5	4336778	PH, RCC1 and FYVE domains-containing protein 1
osa-u.5	4325746	PH, RCC1 and FYVE domains-containing protein 1
zma-u.5	100280426	uncharacterized LOC100280426
zma-u.5	103653921	Putative regulator of chromosome condensation (RCC1) family protein
zma-u.5	103636281	Putative regulator of chromosome condensation (RCC1) family protein
tae-r.2	123046702	PH, RCC1 and FYVE domains-containing protein 1
hvu-r.1	123407055	PH, RCC1 and FYVE domains-containing protein 1-like
hvu-r.1	123445529	PH, RCC1 and FYVE domains-containing protein 1-like
hvu-r.1	123427836	PH, RCC1 and FYVE domains-containing protein 1
sbi-r.1	8057696	uncharacterized LOC8057696
sbi-r.1	8077365	uncharacterized LOC8077365
bdi-r.1	100842512	PH, RCC1 and FYVE domains-containing protein 1
bdi-r.1	100838586	PH, RCC1 and FYVE domains-containing protein 1
bdi-r.1	100836916	PH, RCC1 and FYVE domains-containing protein 1
cre-r.1	CHLRE_16g691050v5	uncharacterized protein

Top 50 coexpressed genes to 102623949 (cit-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102623949 (cit-r.1 coexpression data)

CoexMap"102623949"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0046872 [list] [network] metal ion binding

(1833 genes)

IEA

Protein

XP_052295767.1 [sequence] [blastp]
XP_052295768.1 [sequence] [blastp]
XP_052295769.1 [sequence] [blastp]
XP_052295770.1 [sequence] [blastp]
XP_052295771.1 [sequence] [blastp]
XP_052295772.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for XP_052295767.1)
nucl 10	(predict for XP_052295768.1)
nucl 10	(predict for XP_052295769.1)
nucl 10	(predict for XP_052295770.1)
nucl 10	(predict for XP_052295771.1)
nucl 10	(predict for XP_052295772.1)

Subcellular
localization
TargetP

other 8	(predict for XP_052295767.1)
other 8	(predict for XP_052295768.1)
mito 8, other 6	(predict for XP_052295769.1)
mito 8, other 6	(predict for XP_052295770.1)
other 8	(predict for XP_052295771.1)
other 8	(predict for XP_052295772.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102623949	cit-r.1 for 102630015	cit-r.1 for 102629590	cit-r.1 for 102623335	ath-u.5 for AT5G12350	ath-u.5 for AT5G19420	ath-u.5 for AT1G65920	bra-r.6 for 103856379	bra-r.6 for 103845756	ghi-r.1 for 107891452	ghi-r.1 for 107895189	ghi-r.1 for 107912868	bna-r.1 for 106434266	bna-r.1 for 106403596	gma-u.5 for 100797527	gma-u.5 for 100806439	gma-u.5 for 100791947	vvi-u.5 for 100243300	vvi-u.5 for 100253065	vvi-u.5 for 100244665	ppo-u.5 for 7496775	ppo-u.5 for 18106548	mtr-u.5 for 11425815	mtr-u.5 for 11406734	sly-u.5 for 101262813	sly-u.5 for 101265608	sly-u.5 for 101267670	sot-r.1 for 102600493	sot-r.1 for 102590844	sot-r.1 for 102588539	nta-r.1 for 107807728	nta-r.1 for 107806494	nta-r.1 for 107799299	osa-u.5 for 4336778	osa-u.5 for 4325746	zma-u.5 for 100280426	zma-u.5 for 103653921	zma-u.5 for 103636281	tae-r.2 for 123046702	hvu-r.1 for 123407055	hvu-r.1 for 123445529	hvu-r.1 for 123427836	sbi-r.1 for 8057696	sbi-r.1 for 8077365	bdi-r.1 for 100842512	bdi-r.1 for 100838586	bdi-r.1 for 100836916	cre-r.1 for CHLRE_16g691050v5

Ortholog

Ortholog ID: 695

Species

cit

ath

bra

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

G93

Function^*

PH, RCC1 and FYVE domains-containing protein 1-like