Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g441050v5   uncharacterized protein 
 cre-r.1   CHLRE_07g357650v5   uncharacterized protein 
 cre-r.1   CHLRE_07g320950v5   uncharacterized protein 
 ath-u.5   AL4   alfin-like 4 
 ath-u.5   AL6   alfin-like 6 
 ath-u.5   AL2   alfin-like 2 
 gma-u.5   100170696   PHD finger protein 
 gma-u.5   PHD4   PHD finger superfamily protein 
 gma-u.5   100170698   PHD5 
 sly-u.5   101259267   PHD finger protein ALFIN-LIKE 4 
 sly-u.5   101251316   PHD finger protein ALFIN-LIKE 1 
 sly-u.5   101250743   alfin1-like PHD domain-containing protein 
 osa-u.5   4343868   PHD finger protein ALFIN-LIKE 9-like 
 osa-u.5   9269003   PHD finger protein ALFIN-LIKE 7-like 
 osa-u.5   4342784   PHD finger protein ALFIN-LIKE 2-like 
 zma-u.5   100193399   ALFIN-like transcription factor 
 zma-u.5   100283532   uncharacterized LOC100283532 
 zma-u.5   100273857   uncharacterized LOC100273857 
 bra-r.6   103842964   PHD finger protein ALFIN-LIKE 7 
 bra-r.6   103839442   PHD finger protein ALFIN-LIKE 6 
 vvi-u.5   100852794   PHD finger protein ALFIN-LIKE 4 
 vvi-u.5   100251933   PHD finger protein ALFIN-LIKE 1 
 vvi-u.5   100263503   PHD finger protein ALFIN-LIKE 4 
 ppo-u.5   7478178   PHD finger protein Alfin1 
 ppo-u.5   7476667   PHD finger protein ALFIN-LIKE 4 
 ppo-u.5   7494499   PHD finger protein ALFIN-LIKE 2 
 mtr-u.5   25500530   PHD finger protein ALFIN-LIKE 4 
 mtr-u.5   25481987   PHD finger protein ALFIN-LIKE 4 
 mtr-u.5   25491446   PHD finger protein ALFIN-LIKE 1 
 tae-r.2   123071781   PHD finger protein ALFIN-LIKE 6 
 tae-r.2   123062912   PHD finger protein ALFIN-LIKE 6 
 tae-r.2   123056239   PHD finger protein ALFIN-LIKE 5 
 hvu-r.1   123453008   PHD finger protein ALFIN-LIKE 3-like 
 hvu-r.1   123445099   PHD finger protein ALFIN-LIKE 6-like 
 hvu-r.1   123442808   PHD finger protein ALFIN-LIKE 5 
 ghi-r.1   107907038   PHD finger protein ALFIN-LIKE 4 
 ghi-r.1   107905795   PHD finger protein ALFIN-LIKE 7 
 ghi-r.1   107903455   PHD finger protein ALFIN-LIKE 1 
 bna-r.1   111198625   PHD finger protein ALFIN-LIKE 3 
 bna-r.1   111215755   PHD finger protein ALFIN-LIKE 2-like 
 bna-r.1   125580899   PHD finger protein ALFIN-LIKE 4-like 
 sbi-r.1   110433568   PHD finger protein ALFIN-LIKE 6 
 sbi-r.1   8057052   PHD finger protein ALFIN-LIKE 3 
 sbi-r.1   8079174   PHD finger protein ALFIN-LIKE 9 
 sot-r.1   102580223   PHD finger protein ALFIN-LIKE 1-like 
 sot-r.1   102583083   PHD finger protein ALFIN-LIKE 2-like 
 sot-r.1   102600287   PHD finger protein ALFIN-LIKE 4-like 
 cit-r.1   102628070   PHD finger protein ALFIN-LIKE 2-like 
 cit-r.1   102612029   PHD finger protein ALFIN-LIKE 7 
 cit-r.1   102609956   PHD finger protein ALFIN-LIKE 4 
 bdi-r.1   100834175   PHD finger protein ALFIN-LIKE 3 
 bdi-r.1   100845937   PHD finger protein ALFIN-LIKE 8 
 bdi-r.1   100829290   PHD finger protein ALFIN-LIKE 5 
 nta-r.1   107787715   PHD finger protein ALFIN-LIKE 4-like 
 nta-r.1   107792882   PHD finger protein Alfin1-like 
 nta-r.1   107790155   PHD finger protein ALFIN-LIKE 1-like 

close


Top 50 coexpressed genes to CHLRE_10g441050v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CHLRE_10g441050v5 (cre-r.1 coexpression data)

CoexMap"5716151"


creCHLRE_10g441050v5 | Entrez gene ID : 5716151      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 3 3 3 3 3 3 2 3 3 3 3 3 3 3 3 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (405 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0042393 [list] [network] histone binding  (34 genes)  IEA  
GO:0003712 [list] [network] transcription coregulator activity  (73 genes)  IEA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (112 genes)  IEA  
Protein XP_042920191.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  chlo_mito 4  (predict for XP_042920191.1)
Subcellular
localization
TargetP
mito 5,  other 5  (predict for XP_042920191.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g441050v5
cre-r.1
for
CHLRE_07g357650v5
cre-r.1
for
CHLRE_07g320950v5
ath-u.5
for
AL4
ath-u.5
for
AL6
ath-u.5
for
AL2
gma-u.5
for
100170696
gma-u.5
for
PHD4
gma-u.5
for
100170698
sly-u.5
for
101259267
sly-u.5
for
101251316
sly-u.5
for
101250743
osa-u.5
for
4343868
osa-u.5
for
9269003
osa-u.5
for
4342784
zma-u.5
for
100193399
zma-u.5
for
100283532
zma-u.5
for
100273857
bra-r.6
for
103842964
bra-r.6
for
103839442
vvi-u.5
for
100852794
vvi-u.5
for
100251933
vvi-u.5
for
100263503
ppo-u.5
for
7478178
ppo-u.5
for
7476667
ppo-u.5
for
7494499
mtr-u.5
for
25500530
mtr-u.5
for
25481987
mtr-u.5
for
25491446
tae-r.2
for
123071781
tae-r.2
for
123062912
tae-r.2
for
123056239
hvu-r.1
for
123453008
hvu-r.1
for
123445099
hvu-r.1
for
123442808
ghi-r.1
for
107907038
ghi-r.1
for
107905795
ghi-r.1
for
107903455
bna-r.1
for
111198625
bna-r.1
for
111215755
bna-r.1
for
125580899
sbi-r.1
for
110433568
sbi-r.1
for
8057052
sbi-r.1
for
8079174
sot-r.1
for
102580223
sot-r.1
for
102583083
sot-r.1
for
102600287
cit-r.1
for
102628070
cit-r.1
for
102612029
cit-r.1
for
102609956
bdi-r.1
for
100834175
bdi-r.1
for
100845937
bdi-r.1
for
100829290
nta-r.1
for
107787715
nta-r.1
for
107792882
nta-r.1
for
107790155


Ortholog ID: 163
Species cre cre cre ath ath ath gma gma sly sly sly osa osa osa zma zma zma bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr tae tae tae hvu hvu hvu ghi ghi ghi bna bna bna sbi sbi sbi sot sot sot cit cit cit bdi bdi bdi nta nta nta
Symbol CHLRE_10g441050v5 CHLRE_07g357650v5 CHLRE_07g320950v5 AL2 AL3 AL7 LOC100793126 LOC100794662 LOC101259267 LOC101248299 LOC101264911 LOC9269003 LOC4342784 LOC4324896 LOC100283422 LOC100216893 LOC100192074 LOC103827517 LOC103848022 LOC100852794 LOC100251933 LOC100263503 LOC18109476 LOC7466074 LOC7490325 LOC25500530 LOC25481987 LOC25494361 LOC123187982 LOC123123460 LOC123091217 LOC123426080 LOC123425355 LOC123447832 LOC107905795 LOC107887134 LOC107910658 LOC106452544 LOC106365444 LOC106348570 LOC110433568 LOC8058123 LOC8071208 LOC102599199 FIN1 LOC102605058 LOC102612029 LOC102609956 LOC102609983 LOC100822053 LOC100830499 LOC100829192 LOC107795748 LOC107827993 LOC107800878
Function* uncharacterized protein uncharacterized protein uncharacterized protein alfin-like 2 alfin-like 3 alfin-like 7 PHD finger protein ALFIN-LIKE 1-like PHD finger protein ALFIN-LIKE 5-like PHD finger protein ALFIN-LIKE 4 PHD finger protein ALFIN-LIKE 4 PHD finger protein ALFIN-LIKE 4 PHD finger protein ALFIN-LIKE 7-like PHD finger protein ALFIN-LIKE 2-like PHD finger protein ALFIN-LIKE 6-like uncharacterized LOC100283422 ALFIN-like transcription factor uncharacterized LOC100192074 PHD finger protein ALFIN-LIKE 6 PHD finger protein ALFIN-LIKE 3 PHD finger protein ALFIN-LIKE 4 PHD finger protein ALFIN-LIKE 1 PHD finger protein ALFIN-LIKE 4 PHD finger protein Alfin1 PHD finger protein ALFIN-LIKE 1 PHD finger protein ALFIN-LIKE 2 PHD finger protein ALFIN-LIKE 4 PHD finger protein ALFIN-LIKE 4 PHD finger protein Alfin1 PHD finger protein ALFIN-LIKE 9 PHD finger protein ALFIN-LIKE 3 PHD finger protein ALFIN-LIKE 8 PHD finger protein ALFIN-LIKE 2 PHD finger protein ALFIN-LIKE 9-like PHD finger protein ALFIN-LIKE 8 PHD finger protein ALFIN-LIKE 7 PHD finger protein ALFIN-LIKE 7 PHD finger protein ALFIN-LIKE 7 PHD finger protein ALFIN-LIKE 2 PHD finger protein ALFIN-LIKE 6 PHD finger protein ALFIN-LIKE 4 PHD finger protein ALFIN-LIKE 6 PHD finger protein ALFIN-LIKE 8 PHD finger protein ALFIN-LIKE 1 PHD finger protein ALFIN-LIKE 2 putative alfin-like transcription factor PHD finger protein ALFIN-LIKE 1-like PHD finger protein ALFIN-LIKE 7 PHD finger protein ALFIN-LIKE 4 PHD finger protein ALFIN-LIKE 1 PHD finger protein ALFIN-LIKE 2 PHD finger protein ALFIN-LIKE 6 PHD finger protein ALFIN-LIKE 1 PHD finger protein ALFIN-LIKE 1 PHD finger protein ALFIN-LIKE 5-like PHD finger protein ALFIN-LIKE 5
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03015 mRNA surveillance pathway 3
cre04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
cre03015 mRNA surveillance pathway 2
cre03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath04141 Protein processing in endoplasmic reticulum 3
ath03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 6
gma00020 Citrate cycle (TCA cycle) 3
gma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 4
gma03040 Spliceosome 3
gma04382 Cornified envelope formation 2
gma03050 Proteasome 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00230 Purine metabolism 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00051 Fructose and mannose metabolism 3
tae00052 Galactose metabolism 3
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae03272 Virion - Hepatitis viruses 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 3
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04120 Ubiquitin mediated proteolysis 3
sbi03020 RNA polymerase 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00564 Glycerophospholipid metabolism 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 3
sot00670 One carbon pool by folate 3
sot00260 Glycine, serine and threonine metabolism 2
sot00460 Cyanoamino acid metabolism 2
sot00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 4
sot04070 Phosphatidylinositol signaling system 4
sot04075 Plant hormone signal transduction 4
sot04626 Plant-pathogen interaction 4
sot04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 10
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5716151 5729202 5726584 820290 823316 838013 100793126 100794662 101259267 101248299 101264911 9269003 4342784 4324896 100283422 100216893 100192074 103827517 103848022 100852794 100251933 100263503 18109476 7466074 7490325 25500530 25481987 25494361 123187982 123123460 123091217 123426080 123425355 123447832 107905795 107887134 107910658 106452544 106365444 106348570 110433568 8058123 8071208 102599199 102577447 102605058 102612029 102609956 102609983 100822053 100830499 100829192 107795748 107827993 107800878
The preparation time of this page was 0.1 [sec].