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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_07g357650v5   uncharacterized protein 
 ath-u.5   AL4   alfin-like 4 
 ath-u.5   AL6   alfin-like 6 
 ath-u.5   AL2   alfin-like 2 
 gma-u.5   100170696   PHD finger protein 
 gma-u.5   PHD4   PHD finger superfamily protein 
 gma-u.5   100170698   PHD5 
 sly-u.5   101259267   PHD finger protein ALFIN-LIKE 4 
 sly-u.5   101251316   PHD finger protein ALFIN-LIKE 1 
 sly-u.5   101250743   alfin1-like PHD domain-containing protein 
 osa-u.5   4343868   PHD finger protein ALFIN-LIKE 9-like 
 osa-u.5   9269003   PHD finger protein ALFIN-LIKE 7-like 
 osa-u.5   4342784   PHD finger protein ALFIN-LIKE 2-like 
 zma-u.5   100193399   ALFIN-like transcription factor 
 zma-u.5   100283532   uncharacterized LOC100283532 
 zma-u.5   100273857   uncharacterized LOC100273857 
 vvi-u.5   100852794   PHD finger protein ALFIN-LIKE 4 
 vvi-u.5   100251933   PHD finger protein ALFIN-LIKE 1 
 vvi-u.5   100263503   PHD finger protein ALFIN-LIKE 4 
 ppo-u.5   7478178   PHD finger protein Alfin1 
 ppo-u.5   7476667   PHD finger protein ALFIN-LIKE 4 
 ppo-u.5   7494499   PHD finger protein ALFIN-LIKE 2 
 mtr-u.5   25500530   PHD finger protein ALFIN-LIKE 4 
 mtr-u.5   25481987   PHD finger protein ALFIN-LIKE 4 
 mtr-u.5   25491446   PHD finger protein ALFIN-LIKE 1 

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Top 50 coexpressed genes to CHLRE_07g357650v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_07g357650v5 (cre-r.1 coexpression data)

CoexMap"5729202"


creCHLRE_07g357650v5 | Entrez gene ID : 5729202    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 3 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
Protein XP_042923259.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_042923259.1)
Subcellular
localization
TargetP
scret 4,  other 4  (predict for XP_042923259.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_07g357650v5

.
ath-u.5
for
AL4

.
ath-u.5
for
AL6

.
ath-u.5
for
AL2

.
gma-u.5
for
100170696

.
gma-u.5
for
PHD4

.
gma-u.5
for
100170698

.
sly-u.5
for
101259267

.
sly-u.5
for
101251316

.
sly-u.5
for
101250743

.
osa-u.5
for
4343868

.
osa-u.5
for
9269003

.
osa-u.5
for
4342784

.
zma-u.5
for
100193399

.
zma-u.5
for
100283532

.
zma-u.5
for
100273857

.
vvi-u.5
for
100852794

.
vvi-u.5
for
100251933

.
vvi-u.5
for
100263503

.
ppo-u.5
for
7478178

.
ppo-u.5
for
7476667

.
ppo-u.5
for
7494499

.
mtr-u.5
for
25500530

.
mtr-u.5
for
25481987

.
mtr-u.5
for
25491446

.


Ortholog ID: 163
Species ath ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AL3 AL2 LOC100794662 LOC100793126 LOC101259267 LOC101264911 LOC4342784 LOC9269003 LOC100283422 LOC100216893 LOC103827517 LOC100251933 LOC100852794 LOC7490325 LOC18109476 LOC25481987 LOC25494361 LOC123123460 LOC123187982 LOC123447832 LOC123426080 LOC107910658 LOC107905795 LOC106365444 LOC106348570 CHLRE_07g320950v5 CHLRE_07g357650v5 LOC8058123 LOC110433568 LOC102605058 LOC102599199 LOC102609956 LOC102612029 LOC100829192 LOC100830499 LOC107827993 LOC107795748
Function* alfin-like 3 alfin-like 2 PHD finger protein ALFIN-LIKE 5-like PHD finger protein ALFIN-LIKE 1-like PHD finger protein ALFIN-LIKE 4 PHD finger protein ALFIN-LIKE 4 PHD finger protein ALFIN-LIKE 2-like PHD finger protein ALFIN-LIKE 7-like uncharacterized LOC100283422 ALFIN-like transcription factor PHD finger protein ALFIN-LIKE 6 PHD finger protein ALFIN-LIKE 1 PHD finger protein ALFIN-LIKE 4 PHD finger protein ALFIN-LIKE 2 PHD finger protein Alfin1 PHD finger protein ALFIN-LIKE 4 PHD finger protein Alfin1 PHD finger protein ALFIN-LIKE 3 PHD finger protein ALFIN-LIKE 9 PHD finger protein ALFIN-LIKE 8 PHD finger protein ALFIN-LIKE 2 PHD finger protein ALFIN-LIKE 7 PHD finger protein ALFIN-LIKE 7 PHD finger protein ALFIN-LIKE 6 PHD finger protein ALFIN-LIKE 4 uncharacterized protein uncharacterized protein PHD finger protein ALFIN-LIKE 8 PHD finger protein ALFIN-LIKE 6 PHD finger protein ALFIN-LIKE 1-like PHD finger protein ALFIN-LIKE 2 PHD finger protein ALFIN-LIKE 4 PHD finger protein ALFIN-LIKE 7 PHD finger protein ALFIN-LIKE 1 PHD finger protein ALFIN-LIKE 6 PHD finger protein ALFIN-LIKE 5-like PHD finger protein ALFIN-LIKE 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath04141 Protein processing in endoplasmic reticulum 3
ath03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 4
gma03040 Spliceosome 3
gma04382 Cornified envelope formation 2
gma03050 Proteasome 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 6
gma00020 Citrate cycle (TCA cycle) 3
gma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae03272 Virion - Hepatitis viruses 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00051 Fructose and mannose metabolism 3
tae00052 Galactose metabolism 3
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
cre03015 mRNA surveillance pathway 2
cre03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 3
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04120 Ubiquitin mediated proteolysis 3
sbi03020 RNA polymerase 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 4
sot04070 Phosphatidylinositol signaling system 4
sot04075 Plant hormone signal transduction 4
sot04626 Plant-pathogen interaction 4
sot04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00564 Glycerophospholipid metabolism 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 10
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823316 820290 100794662 100793126 101259267 101264911 4342784 9269003 100283422 100216893 103827517 100251933 100852794 7490325 18109476 25481987 25494361 123123460 123187982 123447832 123426080 107910658 107905795 106365444 106348570 5726584 5729202 8058123 110433568 102605058 102599199 102609956 102612029 100829192 100830499 107827993 107795748
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