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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1  CHLRE_07g344050v5  uncharacterized protein 
 ath-u.5  TOZ  Transducin family protein / WD-40 repeat family protein 
 gma-u.5  102665314  uncharacterized LOC102665314 
 gma-u.5  100783244  transducin beta-like protein 3 
 sly-u.5  101246325  protein TORMOZ EMBRYO DEFECTIVE 
 osa-u.5  4336833  protein TORMOZ EMBRYO DEFECTIVE 
 zma-u.5  103642006  transducin beta-like protein 3 
 zma-u.5  100193557  Transducin family protein / WD-40 repeat family protein 
 bra-r.6  103851063  transducin beta-like protein 3 
 bra-r.6  103846300  transducin beta-like protein 3 
 vvi-u.5  100252767  protein TORMOZ EMBRYO DEFECTIVE 
 ppo-u.5  7493908  protein TORMOZ EMBRYO DEFECTIVE 
 mtr-u.5  25493764  transducin beta-like protein 3 
 tae-r.2  123157014  transducin beta-like protein 3 
 tae-r.2  123054499  transducin beta-like protein 3 
 tae-r.2  123046624  transducin beta-like protein 3 
 hvu-r.1  123427888  transducin beta-like protein 3 
 ghi-r.1  107920077  transducin beta-like protein 3 
 ghi-r.1  121212515  transducin beta-like protein 3 
 bna-r.1  106387689  transducin beta-like protein 3 
 bna-r.1  106371983  transducin beta-like protein 3 
 bna-r.1  106354444  transducin beta-like protein 3 
 sbi-r.1  8071089  transducin beta-like protein 3 
 sot-r.1  102586043  transducin beta-like protein 3 
 cit-r.1  102617966  protein TORMOZ EMBRYO DEFECTIVE 
 bdi-r.1  100823842  transducin beta-like protein 3 
 nta-r.1  107829068  protein TORMOZ EMBRYO DEFECTIVE 
 nta-r.1  107785039  protein TORMOZ EMBRYO DEFECTIVE 
 nta-r.1  107794332  protein TORMOZ EMBRYO DEFECTIVE 

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Top 50 coexpressed genes to CHLRE_07g344050v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_07g344050v5 (cre-r.1 coexpression data)

CoexMap"5718010"


creCHLRE_07g344050v5 | Entrez gene ID : 5718010
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 2 2 1 1 1 3 1 2 3 1 1 1 1 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000472 [list] [network] endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (3 genes)  IEA  
GO:0000480 [list] [network] endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (3 genes)  IEA  
GO CC
GO:0030686 [list] [network] 90S preribosome  (30 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (35 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (152 genes)  IEA  
GO MF
GO:0034511 [list] [network] U3 snoRNA binding  (4 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042922982.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_042922982.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for XP_042922982.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cre-r.1
for
CHLRE_07g344050v5


ath-u.5
for
TOZ


gma-u.5
for
102665314


gma-u.5
for
100783244


sly-u.5
for
101246325


osa-u.5
for
4336833


zma-u.5
for
103642006


zma-u.5
for
100193557


bra-r.6
for
103851063


bra-r.6
for
103846300


vvi-u.5
for
100252767


ppo-u.5
for
7493908


mtr-u.5
for
25493764


tae-r.2
for
123157014


tae-r.2
for
123054499


tae-r.2
for
123046624


hvu-r.1
for
123427888


ghi-r.1
for
107920077


ghi-r.1
for
121212515


bna-r.1
for
106387689


bna-r.1
for
106371983


bna-r.1
for
106354444


sbi-r.1
for
8071089


sot-r.1
for
102586043


cit-r.1
for
102617966


bdi-r.1
for
100823842


nta-r.1
for
107829068


nta-r.1
for
107785039


nta-r.1
for
107794332



Ortholog ID: 6968
Species cre ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna bna sbi sot cit bdi nta nta nta
Symbol CHLRE_07g344050v5 TOZ LOC102665314 LOC100783244 LOC101246325 LOC4336833 LOC103642006 LOC100193557 LOC103851063 LOC103846300 LOC100252767 LOC7493908 LOC25493764 LOC123157014 LOC123190354 LOC123167020 LOC123427888 LOC107920077 LOC121212515 LOC106371983 LOC106354444 LOC125581288 LOC8071089 LOC102586043 LOC102617966 LOC100823842 LOC107829068 LOC107785039 LOC107794332
Function* uncharacterized protein Transducin family protein / WD-40 repeat family protein uncharacterized LOC102665314 transducin beta-like protein 3 protein TORMOZ EMBRYO DEFECTIVE protein TORMOZ EMBRYO DEFECTIVE transducin beta-like protein 3 Transducin family protein / WD-40 repeat family protein transducin beta-like protein 3 transducin beta-like protein 3 protein TORMOZ EMBRYO DEFECTIVE protein TORMOZ EMBRYO DEFECTIVE transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 protein TORMOZ EMBRYO DEFECTIVE transducin beta-like protein 3 protein TORMOZ EMBRYO DEFECTIVE protein TORMOZ EMBRYO DEFECTIVE protein TORMOZ EMBRYO DEFECTIVE
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
zma00230 Purine metabolism 2
zma00250 Alanine, aspartate and glutamate metabolism 2
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 14
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 13
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5718010 831538 102665314 100783244 101246325 4336833 103642006 100193557 103851063 103846300 100252767 7493908 25493764 123157014 123190354 123167020 123427888 107920077 121212515 106371983 106354444 125581288 8071089 102586043 102617966 100823842 107829068 107785039 107794332
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