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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107794332   protein TORMOZ EMBRYO DEFECTIVE 
 nta-r.1   107829068   protein TORMOZ EMBRYO DEFECTIVE 
 nta-r.1   107785039   protein TORMOZ EMBRYO DEFECTIVE 
 sly-u.5   101246325   protein TORMOZ EMBRYO DEFECTIVE 
 sot-r.1   102586043   transducin beta-like protein 3 
 ath-u.5   TOZ   Transducin family protein / WD-40 repeat family protein 
 gma-u.5   102665314   uncharacterized LOC102665314 
 gma-u.5   100783244   transducin beta-like protein 3 
 bra-r.6   103851063   transducin beta-like protein 3 
 bra-r.6   103846300   transducin beta-like protein 3 
 vvi-u.5   100252767   protein TORMOZ EMBRYO DEFECTIVE 
 ppo-u.5   7493908   protein TORMOZ EMBRYO DEFECTIVE 
 mtr-u.5   25493764   transducin beta-like protein 3 
 ghi-r.1   121212515   transducin beta-like protein 3 
 ghi-r.1   107920077   transducin beta-like protein 3 
 bna-r.1   106387689   transducin beta-like protein 3 
 bna-r.1   106371983   transducin beta-like protein 3 
 bna-r.1   106354444   transducin beta-like protein 3 
 cit-r.1   102617966   protein TORMOZ EMBRYO DEFECTIVE 
 osa-u.5   4336833   protein TORMOZ EMBRYO DEFECTIVE 
 zma-u.5   103642006   transducin beta-like protein 3 
 zma-u.5   100193557   Transducin family protein / WD-40 repeat family protein 
 tae-r.2   123167020   transducin beta-like protein 3 
 tae-r.2   123190354   transducin beta-like protein 3 
 tae-r.2   123046624   transducin beta-like protein 3 
 hvu-r.1   123427888   transducin beta-like protein 3 
 sbi-r.1   8071089   transducin beta-like protein 3 
 bdi-r.1   100823842   transducin beta-like protein 3 
 cre-r.1   CHLRE_07g344050v5   uncharacterized protein 

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Top 50 coexpressed genes to 107794332 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107794332 (nta-r.1 coexpression data)

CoexMap"107794332"


ntaLOC107794332 | Entrez gene ID : 107794332      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 2 2 1 1 1 2 3 1 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03008 [list] [network] Ribosome biogenesis in eukaryotes (157 genes)
GO BP
GO:0000472 [list] [network] endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (11 genes)  IEA  
GO:0000480 [list] [network] endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (11 genes)  IEA  
GO CC
GO:0030686 [list] [network] 90S preribosome  (73 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (85 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (353 genes)  IEA  
GO MF
GO:0034511 [list] [network] U3 snoRNA binding  (10 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016472297.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  E.R. 2,  cysk_nucl 2,  chlo 1,  plas 1,  E.R._vacu 1  (predict for XP_016472297.1)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for XP_016472297.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107794332
nta-r.1
for
107829068
nta-r.1
for
107785039
sly-u.5
for
101246325
sot-r.1
for
102586043
ath-u.5
for
TOZ
gma-u.5
for
102665314
gma-u.5
for
100783244
bra-r.6
for
103851063
bra-r.6
for
103846300
vvi-u.5
for
100252767
ppo-u.5
for
7493908
mtr-u.5
for
25493764
ghi-r.1
for
121212515
ghi-r.1
for
107920077
bna-r.1
for
106387689
bna-r.1
for
106371983
bna-r.1
for
106354444
cit-r.1
for
102617966
osa-u.5
for
4336833
zma-u.5
for
103642006
zma-u.5
for
100193557
tae-r.2
for
123167020
tae-r.2
for
123190354
tae-r.2
for
123046624
hvu-r.1
for
123427888
sbi-r.1
for
8071089
bdi-r.1
for
100823842
cre-r.1
for
CHLRE_07g344050v5


Ortholog ID: 6968
Species nta nta nta sly sot ath gma gma bra bra vvi ppo mtr ghi ghi bna bna bna cit osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107794332 LOC107829068 LOC107785039 LOC101246325 LOC102586043 TOZ LOC102665314 LOC100783244 LOC103851063 LOC103846300 LOC100252767 LOC7493908 LOC25493764 LOC121212515 LOC107920077 LOC106371983 LOC106354444 LOC125581288 LOC102617966 LOC4336833 LOC103642006 LOC100193557 LOC123167020 LOC123190354 LOC123157014 LOC123427888 LOC8071089 LOC100823842 CHLRE_07g344050v5
Function* protein TORMOZ EMBRYO DEFECTIVE protein TORMOZ EMBRYO DEFECTIVE protein TORMOZ EMBRYO DEFECTIVE protein TORMOZ EMBRYO DEFECTIVE transducin beta-like protein 3 Transducin family protein / WD-40 repeat family protein uncharacterized LOC102665314 transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 protein TORMOZ EMBRYO DEFECTIVE protein TORMOZ EMBRYO DEFECTIVE transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 protein TORMOZ EMBRYO DEFECTIVE protein TORMOZ EMBRYO DEFECTIVE transducin beta-like protein 3 Transducin family protein / WD-40 repeat family protein transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 transducin beta-like protein 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
zma00230 Purine metabolism 2
zma00250 Alanine, aspartate and glutamate metabolism 2
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 13
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 14
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107794332 107829068 107785039 101246325 102586043 831538 102665314 100783244 103851063 103846300 100252767 7493908 25493764 121212515 107920077 106371983 106354444 125581288 102617966 4336833 103642006 100193557 123167020 123190354 123157014 123427888 8071089 100823842 5718010
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