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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g151400v5   uncharacterized protein 
 ath-u.5   ABCA1   ATP-binding cassette A1 
 gma-u.5   100803263   ABC transporter A family member 1 
 sly-u.5   ABCA1   ABC transporter A family member 1 
 bra-r.6   103857992   ABC transporter A family member 1 
 vvi-u.5   100265905   ABC transporter A family member 1 
 ppo-u.5   7496128   ABC transporter A family member 1 
 mtr-u.5   11413324   ABC transporter A family member 1 
 ghi-r.1   107918156   ABC transporter A family member 1 
 ghi-r.1   107922075   ABC transporter A family member 1 
 bna-r.1   106352805   ABC transporter A family member 1 
 bna-r.1   106428160   ABC transporter A family member 1 
 sot-r.1   102601830   ABC transporter A family member 1 
 cit-r.1   102625041   ABC transporter A family member 1 
 nta-r.1   107781095   ABC transporter A family member 1 
 nta-r.1   107800372   ABC transporter A family member 1 

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Top 50 coexpressed genes to CHLRE_03g151400v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g151400v5 (cre-r.1 coexpression data)

CoexMap"5721129"


creCHLRE_03g151400v5 | Entrez gene ID : 5721129    
Species cre ath gma sly bra vvi ppo mtr ghi bna sot cit nta sbi osa tae hvu zma bdi
Paralog 1 1 1 1 1 1 1 1 2 2 1 1 2 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006869 [list] [network] lipid transport  (24 genes)  IEA  
GO:0055085 [list] [network] transmembrane transport  (461 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (1543 genes)  IEA  
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (3013 genes)  IEA  
GO MF
GO:0005319 [list] [network] lipid transporter activity  (22 genes)  IEA  
GO:0140359 [list] [network] ABC-type transporter activity  (65 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (290 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_042925648.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  nucl 1,  extr 1,  cysk 1,  cysk_nucl 1  (predict for XP_042925648.1)
Subcellular
localization
TargetP
mito 9,  other 3  (predict for XP_042925648.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g151400v5
ath-u.5
for
ABCA1
gma-u.5
for
100803263
sly-u.5
for
ABCA1
bra-r.6
for
103857992
vvi-u.5
for
100265905
ppo-u.5
for
7496128
mtr-u.5
for
11413324
ghi-r.1
for
107918156
ghi-r.1
for
107922075
bna-r.1
for
106352805
bna-r.1
for
106428160
sot-r.1
for
102601830
cit-r.1
for
102625041
nta-r.1
for
107781095
nta-r.1
for
107800372


Ortholog ID: 13155
Species cre ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol CHLRE_03g151400v5 ABCA1 LOC100803263 ABCA1 LOC103857992 LOC100265905 LOC7496128 LOC11413324 LOC107918156 LOC107922075 LOC106352805 LOC106428160 LOC102601830 LOC102625041 LOC107781095 LOC107800372
Function* uncharacterized protein ATP-binding cassette A1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 3
gma00230 Purine metabolism 2
gma00232 Caffeine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo04136 Autophagy - other 2
ppo04518 Integrin signaling 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 5
ghi04141 Protein processing in endoplasmic reticulum 3
ghi02010 ABC transporters 2
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 5
bna04120 Ubiquitin mediated proteolysis 4
bna04146 Peroxisome 3
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 5
bna04120 Ubiquitin mediated proteolysis 4
bna04146 Peroxisome 3
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5721129 818768 100803263 101266927 103857992 100265905 7496128 11413324 107918156 107922075 106352805 106428160 102601830 102625041 107781095 107800372
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