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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100265905   ABC transporter A family member 1 
 vvi-r.5   100265905   ABC transporter A family member 1 
 ath-u.5   ABCA1   ATP-binding cassette A1 
 gma-u.5   100803263   ABC transporter A family member 1 
 ppo-u.5   7496128   ABC transporter A family member 1 
 mtr-u.5   11413324   ABC transporter A family member 1 
 sly-u.5   ABCA1   ABC transporter A family member 1 

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Top 50 coexpressed genes to 100265905 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100265905 (vvi-u.5 coexpression data)

CoexMap"100265905"


vviLOC100265905 | Entrez gene ID : 100265905      
Species vvi ath gma ppo mtr sly bdi hvu bra cit bna sbi ghi osa sot nta cre tae zma
Paralog 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi02010 [list] [network] ABC transporters (85 genes)
GO BP
GO:0006869 [list] [network] lipid transport  (63 genes)  IEA  
GO:0055085 [list] [network] transmembrane transport  (879 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (2991 genes)  IEA  
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (4908 genes)  IEA  
GO MF
GO:0005319 [list] [network] lipid transporter activity  (37 genes)  IEA  
GO:0140359 [list] [network] ABC-type transporter activity  (122 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (487 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2120 genes)  IEA  
Protein XP_002284204.1 [sequence] [blastp]
XP_010653767.1 [sequence] [blastp]
XP_059595312.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 9,  chlo 1,  pero 1  (predict for XP_002284204.1)
nucl 4,  plas 4,  nucl_plas 4  (predict for XP_010653767.1)
plas 9,  chlo 1,  pero 1  (predict for XP_059595312.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_002284204.1)
scret 9,  other 7  (predict for XP_010653767.1)
mito 9  (predict for XP_059595312.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100265905
vvi-r.5
for
100265905
ath-u.5
for
ABCA1
gma-u.5
for
100803263
ppo-u.5
for
7496128
mtr-u.5
for
11413324
sly-u.5
for
ABCA1


Ortholog ID: 13155
Species vvi ath gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta cre
Symbol LOC100265905 ABCA1 LOC100803263 LOC103857992 LOC7496128 LOC11413324 LOC107918156 LOC107922075 LOC106428160 LOC106352805 LOC102625041 ABCA1 LOC102601830 LOC107800372 LOC107781095 CHLRE_03g151400v5
Function* ABC transporter A family member 1 ATP-binding cassette A1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 ABC transporter A family member 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 3
gma00230 Purine metabolism 2
gma00232 Caffeine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo04136 Autophagy - other 2
ppo04518 Integrin signaling 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 5
ghi04141 Protein processing in endoplasmic reticulum 3
ghi02010 ABC transporters 2
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 5
bna04120 Ubiquitin mediated proteolysis 4
bna04146 Peroxisome 3
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 5
bna04120 Ubiquitin mediated proteolysis 4
bna04146 Peroxisome 3
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100265905 818768 100803263 103857992 7496128 11413324 107918156 107922075 106428160 106352805 102625041 101266927 102601830 107800372 107781095 5721129
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