Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g657000v5   uncharacterized protein 
 ath-u.5   TAFII15   TBP-associated factor II 15 
 gma-u.5   100809339   transcription initiation factor TFIID subunit 10 
 gma-u.5   100500618   putative TBP-associated factor 10 
 sly-u.5   101254982   transcription initiation factor TFIID subunit 10 
 osa-u.5   4347127   transcription initiation factor TFIID subunit 10 
 zma-u.5   100281967   transcription initiation factor TFIID subunit 10 
 bra-r.6   103851590   transcription initiation factor TFIID subunit 10 
 bra-r.6   103834594   transcription initiation factor TFIID subunit 10 
 vvi-u.5   100264817   transcription initiation factor TFIID subunit 10 
 vvi-u.5   100247660   transcription initiation factor TFIID subunit 10 
 ppo-u.5   7465449   transcription initiation factor TFIID subunit 10 
 mtr-u.5   11432171   transcription initiation factor TFIID subunit 10 
 tae-r.2   123112034   transcription initiation factor TFIID subunit 10 
 tae-r.2   123103800   transcription initiation factor TFIID subunit 10 
 tae-r.2   123121577   transcription initiation factor TFIID subunit 10 
 hvu-r.1   123397827   transcription initiation factor TFIID subunit 10-like 
 hvu-r.1   123411364   transcription initiation factor TFIID subunit 10-like 
 ghi-r.1   121203640   transcription initiation factor TFIID subunit 10 
 ghi-r.1   107953719   transcription initiation factor TFIID subunit 10 
 ghi-r.1   107906791   transcription initiation factor TFIID subunit 10 
 bna-r.1   106373171   transcription initiation factor TFIID subunit 10-like 
 bna-r.1   106390020   transcription initiation factor TFIID subunit 10 
 bna-r.1   106375403   transcription initiation factor TFIID subunit 10 
 sbi-r.1   8056189   transcription initiation factor TFIID subunit 10 
 sbi-r.1   8060290   transcription initiation factor TFIID subunit 10 
 sot-r.1   102579171   transcription initiation factor TFIID subunit 10 
 cit-r.1   102609676   transcription initiation factor TFIID subunit 10 
 bdi-r.1   100846337   transcription initiation factor TFIID subunit 10 
 nta-r.1   107780171   transcription initiation factor TFIID subunit 10 
 nta-r.1   107811632   transcription initiation factor TFIID subunit 10 
 nta-r.1   107812180   transcription initiation factor TFIID subunit 10-like 

close


Top 50 coexpressed genes to CHLRE_16g657000v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CHLRE_16g657000v5 (cre-r.1 coexpression data)

CoexMap"5723462"


creCHLRE_16g657000v5 | Entrez gene ID : 5723462      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 2 2 1 1 3 2 3 3 2 1 1 1 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03022 [list] [network] Basal transcription factors (19 genes)
GO BP
GO:0006367 [list] [network] transcription initiation at RNA polymerase II promoter  (25 genes)  IEA  
GO CC
GO:0000124 [list] [network] SAGA complex  (12 genes)  IEA  
GO:0005669 [list] [network] transcription factor TFIID complex  (14 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:1990841 [list] [network] promoter-specific chromatin binding  (2 genes)  IEA  
GO:0016251 [list] [network] RNA polymerase II general transcription initiation factor activity  (14 genes)  IEA  
Protein XP_001697833.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  mito 3,  chlo 1,  cyto_mito 1,  mito_plas 1  (predict for XP_001697833.1)
Subcellular
localization
TargetP
chlo 4,  other 4  (predict for XP_001697833.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g657000v5
ath-u.5
for
TAFII15
gma-u.5
for
100809339
gma-u.5
for
100500618
sly-u.5
for
101254982
osa-u.5
for
4347127
zma-u.5
for
100281967
bra-r.6
for
103851590
bra-r.6
for
103834594
vvi-u.5
for
100264817
vvi-u.5
for
100247660
ppo-u.5
for
7465449
mtr-u.5
for
11432171
tae-r.2
for
123112034
tae-r.2
for
123103800
tae-r.2
for
123121577
hvu-r.1
for
123397827
hvu-r.1
for
123411364
ghi-r.1
for
121203640
ghi-r.1
for
107953719
ghi-r.1
for
107906791
bna-r.1
for
106373171
bna-r.1
for
106390020
bna-r.1
for
106375403
sbi-r.1
for
8056189
sbi-r.1
for
8060290
sot-r.1
for
102579171
cit-r.1
for
102609676
bdi-r.1
for
100846337
nta-r.1
for
107780171
nta-r.1
for
107811632
nta-r.1
for
107812180


Ortholog ID: 5360
Species cre ath gma gma sly osa zma bra bra vvi vvi ppo mtr tae tae tae hvu hvu ghi ghi ghi bna bna bna sbi sbi sot cit bdi nta nta nta
Symbol CHLRE_16g657000v5 TAFII15 LOC100809339 LOC100500618 LOC101254982 LOC4347127 LOC100281967 LOC103851590 LOC103834594 LOC100264817 LOC100247660 LOC7465449 LOC11432171 LOC123112034 LOC123103800 LOC123151463 LOC123397827 LOC123411364 LOC107953719 LOC107937933 LOC107939415 LOC106373171 LOC106390020 LOC106424208 LOC8056189 LOC8060290 LOC102579171 LOC102609676 LOC100846337 LOC107780171 LOC107811632 LOC107812180
Function* uncharacterized protein TBP-associated factor II 15 transcription initiation factor TFIID subunit 10 putative TBP-associated factor 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10-like transcription initiation factor TFIID subunit 10-like transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10-like transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10-like transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma03022 Basal transcription factors 2
zma03020 RNA polymerase 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 3
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 5
mtr04144 Endocytosis 4
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae04142 Lysosome 3
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 6
ghi03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi03022 Basal transcription factors 2
ghi03010 Ribosome 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 6
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 4
sot04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03022 Basal transcription factors 2
bdi03250 Viral life cycle - HIV-1 2
bdi03272 Virion - Hepatitis viruses 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03022 Basal transcription factors 3
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5723462 829300 100809339 100500618 101254982 4347127 100281967 103851590 103834594 100264817 100247660 7465449 11432171 123112034 123103800 123151463 123397827 123411364 107953719 107937933 107939415 106373171 106390020 106424208 8056189 8060290 102579171 102609676 100846337 107780171 107811632 107812180
The preparation time of this page was 0.3 [sec].