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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100809339   transcription initiation factor TFIID subunit 10 
 gma-r.7   100809339   transcription initiation factor TFIID subunit 10 
 gma-u.5   100500618   putative TBP-associated factor 10 
 mtr-u.5   11432171   transcription initiation factor TFIID subunit 10 
 ppo-u.5   7465449   transcription initiation factor TFIID subunit 10 
 ath-u.5   TAFII15   TBP-associated factor II 15 
 vvi-u.5   100247660   transcription initiation factor TFIID subunit 10 
 vvi-u.5   100264817   transcription initiation factor TFIID subunit 10 
 sly-u.5   101254982   transcription initiation factor TFIID subunit 10 
 osa-u.5   4347127   transcription initiation factor TFIID subunit 10 
 zma-u.5   100281967   transcription initiation factor TFIID subunit 10 

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Top 50 coexpressed genes to 100809339 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100809339 (gma-u.5 coexpression data)

CoexMap"100809339"


gmaLOC100809339 | Entrez gene ID : 100809339      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03022 [list] [network] Basal transcription factors (90 genes)
GO BP
GO:0006367 [list] [network] transcription initiation at RNA polymerase II promoter  (62 genes)  IEA  
GO CC
GO:0000124 [list] [network] SAGA complex  (30 genes)  IEA  
GO:0005669 [list] [network] transcription factor TFIID complex  (35 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:1990841 [list] [network] promoter-specific chromatin binding  (4 genes)  IEA  
GO:0016251 [list] [network] RNA polymerase II general transcription initiation factor activity  (39 genes)  IEA  
Protein XP_003524747.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 2,  cysk 1,  mito_plas 1  (predict for XP_003524747.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003524747.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100809339

.
gma-r.7
for
100809339

.
gma-u.5
for
100500618

.
mtr-u.5
for
11432171

.
ppo-u.5
for
7465449

.
ath-u.5
for
TAFII15

.
vvi-u.5
for
100247660

.
vvi-u.5
for
100264817

.
sly-u.5
for
101254982

.
osa-u.5
for
4347127

.
zma-u.5
for
100281967

.


Ortholog ID: 5360
Species ath gma gma sly osa zma bra bra vvi vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol TAFII15 LOC100809339 LOC100500618 LOC101254982 LOC4347127 LOC100281967 LOC103851590 LOC103834594 LOC100247660 LOC100264817 LOC7465449 LOC11432171 LOC123103800 LOC123112034 LOC123411364 LOC123397827 LOC107953719 LOC107939415 LOC106390020 LOC106373171 CHLRE_16g657000v5 LOC8056189 LOC8060290 LOC102579171 LOC102609676 LOC100846337 LOC107811632 LOC107780171
Function* TBP-associated factor II 15 transcription initiation factor TFIID subunit 10 putative TBP-associated factor 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10-like transcription initiation factor TFIID subunit 10-like transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10-like uncharacterized protein transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma03022 Basal transcription factors 2
zma03020 RNA polymerase 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 3
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 5
mtr04144 Endocytosis 4
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi03022 Basal transcription factors 2
ghi03010 Ribosome 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 6
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 4
sot04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03022 Basal transcription factors 2
bdi03250 Viral life cycle - HIV-1 2
bdi03272 Virion - Hepatitis viruses 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03022 Basal transcription factors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829300 100809339 100500618 101254982 4347127 100281967 103851590 103834594 100247660 100264817 7465449 11432171 123103800 123112034 123411364 123397827 107953719 107939415 106390020 106373171 5723462 8056189 8060290 102579171 102609676 100846337 107811632 107780171
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