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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106390020   transcription initiation factor TFIID subunit 10 
 bna-r.1   106375403   transcription initiation factor TFIID subunit 10 
 bna-r.1   106373171   transcription initiation factor TFIID subunit 10-like 
 bna-r.1   106424208   transcription initiation factor TFIID subunit 10-like 
 bra-r.6   103851590   transcription initiation factor TFIID subunit 10 
 bra-r.6   103834594   transcription initiation factor TFIID subunit 10 
 ath-u.5   TAFII15   TBP-associated factor II 15 
 ghi-r.1   121203640   transcription initiation factor TFIID subunit 10 
 ghi-r.1   107953719   transcription initiation factor TFIID subunit 10 
 ghi-r.1   107939415   transcription initiation factor TFIID subunit 10 
 cit-r.1   102609676   transcription initiation factor TFIID subunit 10 
 gma-u.5   100809339   transcription initiation factor TFIID subunit 10 
 gma-u.5   100500618   putative TBP-associated factor 10 
 vvi-u.5   100247660   transcription initiation factor TFIID subunit 10 
 vvi-u.5   100264817   transcription initiation factor TFIID subunit 10 
 ppo-u.5   7465449   transcription initiation factor TFIID subunit 10 
 mtr-u.5   11432171   transcription initiation factor TFIID subunit 10 
 sly-u.5   101254982   transcription initiation factor TFIID subunit 10 
 sot-r.1   102579171   transcription initiation factor TFIID subunit 10 
 nta-r.1   107780171   transcription initiation factor TFIID subunit 10 
 nta-r.1   107811632   transcription initiation factor TFIID subunit 10 
 nta-r.1   107812180   transcription initiation factor TFIID subunit 10-like 
 osa-u.5   4347127   transcription initiation factor TFIID subunit 10 
 zma-u.5   100281967   transcription initiation factor TFIID subunit 10 
 tae-r.2   123112034   transcription initiation factor TFIID subunit 10 
 tae-r.2   123121577   transcription initiation factor TFIID subunit 10 
 tae-r.2   123151463   transcription initiation factor TFIID subunit 10 
 hvu-r.1   123397827   transcription initiation factor TFIID subunit 10-like 
 hvu-r.1   123411364   transcription initiation factor TFIID subunit 10-like 
 sbi-r.1   8056189   transcription initiation factor TFIID subunit 10 
 sbi-r.1   8060290   transcription initiation factor TFIID subunit 10 
 bdi-r.1   100846337   transcription initiation factor TFIID subunit 10 
 cre-r.1   CHLRE_16g657000v5   uncharacterized protein 

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Top 50 coexpressed genes to 106390020 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106390020 (bna-r.1 coexpression data)

CoexMap"106390020"


bnaLOC106390020 | Entrez gene ID : 106390020    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 3 1 2 2 1 1 1 1 3 1 1 3 2 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03022 [list] [network] Basal transcription factors (161 genes)
GO BP
GO:0006367 [list] [network] transcription initiation at RNA polymerase II promoter  (114 genes)  IEA  
GO CC
GO:0000124 [list] [network] SAGA complex  (54 genes)  IEA  
GO:0005669 [list] [network] transcription factor TFIID complex  (56 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:1990841 [list] [network] promoter-specific chromatin binding  (6 genes)  IEA  
GO:0016251 [list] [network] RNA polymerase II general transcription initiation factor activity  (57 genes)  IEA  
Protein XP_013685850.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 2,  nucl 1,  extr 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1  (predict for XP_013685850.2)
Subcellular
localization
TargetP
other 9  (predict for XP_013685850.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106390020
bna-r.1
for
106375403
bna-r.1
for
106373171
bna-r.1
for
106424208
bra-r.6
for
103851590
bra-r.6
for
103834594
ath-u.5
for
TAFII15
ghi-r.1
for
121203640
ghi-r.1
for
107953719
ghi-r.1
for
107939415
cit-r.1
for
102609676
gma-u.5
for
100809339
gma-u.5
for
100500618
vvi-u.5
for
100247660
vvi-u.5
for
100264817
ppo-u.5
for
7465449
mtr-u.5
for
11432171
sly-u.5
for
101254982
sot-r.1
for
102579171
nta-r.1
for
107780171
nta-r.1
for
107811632
nta-r.1
for
107812180
osa-u.5
for
4347127
zma-u.5
for
100281967
tae-r.2
for
123112034
tae-r.2
for
123121577
tae-r.2
for
123151463
hvu-r.1
for
123397827
hvu-r.1
for
123411364
sbi-r.1
for
8056189
sbi-r.1
for
8060290
bdi-r.1
for
100846337
cre-r.1
for
CHLRE_16g657000v5


Ortholog ID: 5360
Species bna bna bna bra bra ath ghi ghi ghi cit gma gma vvi vvi ppo mtr sly sot nta nta nta osa zma tae tae tae hvu hvu sbi sbi bdi cre
Symbol LOC106390020 LOC106373171 LOC106424208 LOC103851590 LOC103834594 TAFII15 LOC107953719 LOC107939415 LOC107937933 LOC102609676 LOC100809339 LOC100500618 LOC100247660 LOC100264817 LOC7465449 LOC11432171 LOC101254982 LOC102579171 LOC107780171 LOC107811632 LOC107812180 LOC4347127 LOC100281967 LOC123112034 LOC123151463 LOC123103800 LOC123397827 LOC123411364 LOC8056189 LOC8060290 LOC100846337 CHLRE_16g657000v5
Function* transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10-like transcription initiation factor TFIID subunit 10-like transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 TBP-associated factor II 15 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 putative TBP-associated factor 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10-like transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10-like transcription initiation factor TFIID subunit 10-like transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 transcription initiation factor TFIID subunit 10 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 6
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi03022 Basal transcription factors 2
ghi03010 Ribosome 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 6
ghi03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 3
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 5
mtr04144 Endocytosis 4
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 4
sot04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03022 Basal transcription factors 3
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma03022 Basal transcription factors 2
zma03020 RNA polymerase 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae04142 Lysosome 3
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03022 Basal transcription factors 2
bdi03250 Viral life cycle - HIV-1 2
bdi03272 Virion - Hepatitis viruses 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106390020 106373171 106424208 103851590 103834594 829300 107953719 107939415 107937933 102609676 100809339 100500618 100247660 100264817 7465449 11432171 101254982 102579171 107780171 107811632 107812180 4347127 100281967 123112034 123151463 123103800 123397827 123411364 8056189 8060290 100846337 5723462
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