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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_13g606000v5   uncharacterized protein 
 ath-u.5   EMB2785   elongation factor family protein 
 gma-u.5   100789218   50S ribosomal subunit assembly factor BipA 
 gma-u.5   100782425   50S ribosomal subunit assembly factor BipA 
 sly-u.5   101257189   uncharacterized LOC101257189 
 osa-u.5   4327008   uncharacterized LOC4327008 
 zma-u.5   100382669   uncharacterized LOC100382669 
 bra-r.6   103865101   GTP-binding protein TypA/BipA homolog 
 vvi-u.5   100247278   uncharacterized LOC100247278 
 ppo-u.5   18104559   uncharacterized LOC18104559 
 mtr-u.5   11419376   50S ribosomal subunit assembly factor BipA 
 tae-r.2   123070800   50S ribosomal subunit assembly factor BipA 
 tae-r.2   123079190   50S ribosomal subunit assembly factor BipA 
 tae-r.2   123062075   50S ribosomal subunit assembly factor BipA 
 hvu-r.1   123444426   50S ribosomal subunit assembly factor BipA 
 ghi-r.1   107959777   50S ribosomal subunit assembly factor BipA 
 ghi-r.1   107934354   50S ribosomal subunit assembly factor BipA 
 bna-r.1   106437566   50S ribosomal subunit assembly factor BipA-like 
 bna-r.1   106406589   50S ribosomal subunit assembly factor BipA 
 bna-r.1   111215080   50S ribosomal subunit assembly factor BipA-like 
 sbi-r.1   8075587   GTP-binding protein TypA/BipA homolog 
 sot-r.1   102591349   GTP-binding protein TypA/BipA homolog 
 cit-r.1   102618580   uncharacterized LOC102618580 
 bdi-r.1   100840121   GTP-binding protein TypA/BipA homolog 
 nta-r.1   107784041   uncharacterized LOC107784041 
 nta-r.1   107788877   uncharacterized LOC107788877 

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Top 50 coexpressed genes to CHLRE_13g606000v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_13g606000v5 (cre-r.1 coexpression data)

CoexMap"5724634"


creCHLRE_13g606000v5 | Entrez gene ID : 5724634      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 1 2 3 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (370 genes)  IEA  
GO:0005829 [list] [network] cytosol  (481 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (103 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (130 genes)  IEA  
Protein XP_042917853.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_042917853.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_042917853.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_13g606000v5
ath-u.5
for
EMB2785
gma-u.5
for
100789218
gma-u.5
for
100782425
sly-u.5
for
101257189
osa-u.5
for
4327008
zma-u.5
for
100382669
bra-r.6
for
103865101
vvi-u.5
for
100247278
ppo-u.5
for
18104559
mtr-u.5
for
11419376
tae-r.2
for
123070800
tae-r.2
for
123079190
tae-r.2
for
123062075
hvu-r.1
for
123444426
ghi-r.1
for
107959777
ghi-r.1
for
107934354
bna-r.1
for
106437566
bna-r.1
for
106406589
bna-r.1
for
111215080
sbi-r.1
for
8075587
sot-r.1
for
102591349
cit-r.1
for
102618580
bdi-r.1
for
100840121
nta-r.1
for
107784041
nta-r.1
for
107788877


Ortholog ID: 9409
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_13g606000v5 EMB2785 LOC100789218 LOC100782425 LOC101257189 LOC4327008 LOC100382669 LOC103865101 LOC100247278 LOC18104559 LOC11419376 LOC123070800 LOC123079190 LOC123062075 LOC123444426 LOC107959777 LOC107934354 LOC106437566 LOC106406589 LOC111215080 LOC8075587 LOC102591349 LOC102618580 LOC100840121 LOC107784041 LOC107788877
Function* uncharacterized protein elongation factor family protein 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA uncharacterized LOC101257189 uncharacterized LOC4327008 uncharacterized LOC100382669 GTP-binding protein TypA/BipA homolog uncharacterized LOC100247278 uncharacterized LOC18104559 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA-like 50S ribosomal subunit assembly factor BipA 50S ribosomal subunit assembly factor BipA-like GTP-binding protein TypA/BipA homolog GTP-binding protein TypA/BipA homolog uncharacterized LOC102618580 GTP-binding protein TypA/BipA homolog uncharacterized LOC107784041 uncharacterized LOC107788877
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
zma03010 Ribosome 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi01240 Biosynthesis of cofactors 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
sot03020 RNA polymerase 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03010 Ribosome 3
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5724634 817658 100789218 100782425 101257189 4327008 100382669 103865101 100247278 18104559 11419376 123070800 123079190 123062075 123444426 107959777 107934354 106437566 106406589 111215080 8075587 102591349 102618580 100840121 107784041 107788877
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